RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.53
TRAM1-204ENST00000521049 HSPG2P98160 4391 aa11.71□□□□□ -0.53
TRAM1-204ENST00000521049 ZNF705FA8MVS1 300 aaPredicted RBP11.7□□□□□ -0.54
TRAM1-204ENST00000521049 ATG12O94817 140 aa11.7□□□□□ -0.54
TRAM1-204ENST00000521049 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
TRAM1-204ENST00000521049 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
TRAM1-204ENST00000521049 BSXQ3C1V8 233 aa11.7□□□□□ -0.54
TRAM1-204ENST00000521049 GPX8Q8TED1 209 aa11.7□□□□□ -0.54
TRAM1-204ENST00000521049 YIPF6Q96EC8 236 aa11.7□□□□□ -0.54
TRAM1-204ENST00000521049 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
TRAM1-204ENST00000521049 FAM90A26D6RGX4 464 aa11.69□□□□□ -0.54
TRAM1-204ENST00000521049 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
TRAM1-204ENST00000521049 RND3P61587 244 aa11.69□□□□□ -0.54
TRAM1-204ENST00000521049 SAMD12Q8N8I0 201 aa11.69□□□□□ -0.54
TRAM1-204ENST00000521049 OR1S2Q8NGQ3 325 aa11.69□□□□□ -0.54
TRAM1-204ENST00000521049 ENY2Q9NPA8 101 aa11.69□□□□□ -0.54
TRAM1-204ENST00000521049 RPS10-NUDT3A0A1W2PQS6 291 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 IGLC1P0CG04 106 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 SMIM18P0DKX4 95 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 HLA-DRB4P13762 266 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 HOXA1P49639 335 aaPredicted RBP11.68□□□□□ -0.54
TRAM1-204ENST00000521049 EMP1P54849 157 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 OXA1LQ15070 435 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 ZNF486Q96H40 463 aaPredicted RBP11.68□□□□□ -0.54
TRAM1-204ENST00000521049 SCPEP1Q9HB40 452 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 NRN1Q9NPD7 142 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 DKK2Q9UBU2 259 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 RFNGQ9Y644 331 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 HLA-DRB4X5D2U9 266 aa11.68□□□□□ -0.54
TRAM1-204ENST00000521049 BUB3O43684 328 aa11.67□□□□□ -0.54
TRAM1-204ENST00000521049 NKX2-1P43699 371 aaPredicted RBP11.67□□□□□ -0.54
TRAM1-204ENST00000521049 AKR1C2P52895 323 aa11.67□□□□□ -0.54
TRAM1-204ENST00000521049 DHODHQ02127 395 aa11.67□□□□□ -0.54
TRAM1-204ENST00000521049 NIPSNAP3BQ9BS92 247 aa11.67□□□□□ -0.54
TRAM1-204ENST00000521049 SLC25A4P12235 298 aa11.66□□□□□ -0.54
TRAM1-204ENST00000521049 RPS19P39019 145 aaKnown RBP11.66□□□□□ -0.54
TRAM1-204ENST00000521049 HTR2BP41595 481 aa11.66□□□□□ -0.54
TRAM1-204ENST00000521049 FAM3BP58499 235 aaPredicted RBP11.66□□□□□ -0.54
TRAM1-204ENST00000521049 PRSS54Q6PEW0 395 aa11.66□□□□□ -0.54
TRAM1-204ENST00000521049 TP53RKQ96S44 253 aa11.66□□□□□ -0.54
TRAM1-204ENST00000521049 C3orf85A0A1B0GTC6 90 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 SMIM31A0A1B0GVY4 71 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 GSTZ1O43708 216 aaPredicted RBP11.65□□□□□ -0.54
TRAM1-204ENST00000521049 PGAM2P15259 253 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 OR10J1P30954 320 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 RCVRNP35243 200 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 TGFBR1P36897 503 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 PIGPP57054 158 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 SPCS3P61009 180 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 LSM3P62310 102 aaKnown RBP11.65□□□□□ -0.54
TRAM1-204ENST00000521049 USF2Q15853 346 aaPredicted RBP11.65□□□□□ -0.54
TRAM1-204ENST00000521049 FAM222AQ5U5X8 452 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 SIGLEC15Q6ZMC9 328 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 OR52E5Q8NH55 327 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 RRNAD1Q96FB5 475 aaKnown RBP11.65□□□□□ -0.54
TRAM1-204ENST00000521049 CLUHP3Q96NS8 147 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 FUNDC2Q9BWH2 189 aa11.65□□□□□ -0.54
TRAM1-204ENST00000521049 MRPS26Q9BYN8 205 aaKnown RBP11.65□□□□□ -0.54
TRAM1-204ENST00000521049 IGHV3OR16-12A0A075B7B8 117 aa11.64□□□□□ -0.55
TRAM1-204ENST00000521049 C16orf90A8MZG2 172 aa11.64□□□□□ -0.55
TRAM1-204ENST00000521049 IL4P05112 153 aa11.64□□□□□ -0.55
TRAM1-204ENST00000521049 RND2P52198 227 aa11.64□□□□□ -0.55
TRAM1-204ENST00000521049 AARDQ4LEZ3 155 aa11.64□□□□□ -0.55
TRAM1-204ENST00000521049 C2orf83Q53S99 150 aa11.64□□□□□ -0.55
TRAM1-204ENST00000521049 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
TRAM1-204ENST00000521049 RD3LP0DJH9 198 aa11.63□□□□□ -0.55
TRAM1-204ENST00000521049 PI3P19957 117 aa11.63□□□□□ -0.55
TRAM1-204ENST00000521049 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
TRAM1-204ENST00000521049 ETFRF1Q6IPR1 90 aa11.63□□□□□ -0.55
TRAM1-204ENST00000521049 LHFPL1Q86WI0 220 aa11.63□□□□□ -0.55
TRAM1-204ENST00000521049 MAPKAPK5-AS1Q8N8E1 139 aa11.63□□□□□ -0.55
TRAM1-204ENST00000521049 SAV1Q9H4B6 383 aaPredicted RBP11.63□□□□□ -0.55
TRAM1-204ENST00000521049 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.63□□□□□ -0.55
TRAM1-204ENST00000521049 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 M0QYG6 137 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 B3GALNT1O75752 331 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 TOMM40O96008 361 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 APOA1P02647 267 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 HTN3P15516 51 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 UCP1P25874 307 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 FXYD7P58549 80 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 TNP2Q05952 138 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 SP6Q3SY56 376 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 GDF5OSQ5U4N7 250 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 TMEM88Q6PEY1 159 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 FOXI2Q6ZQN5 318 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 FAM219AQ8IW50 185 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 HEYLQ9NQ87 328 aaPredicted RBP11.62□□□□□ -0.55
TRAM1-204ENST00000521049 LRP1BQ9NZR2 4599 aa11.62□□□□□ -0.55
TRAM1-204ENST00000521049 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 ID1P41134 155 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 VBP1P61758 197 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 NCS1P62166 190 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 SPATA31B1PQ5VZV4 182 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 SNX29P2Q8IUI4 249 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 ZNF709Q8N972 641 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 C15orf53Q8NAA6 179 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 NPIPB3Q92617 1050 aa11.61□□□□□ -0.55
TRAM1-204ENST00000521049 COPZ2Q9P299 210 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms