RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 OR2C1O95371 312 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 TOMM40O96008 361 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 METTL15P1P0C7V9 234 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 RPL12P30050 165 aaKnown RBP4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 OR10J1P30954 320 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 S100A7P31151 101 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 HOXD3P31249 432 aaPredicted RBP4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 GPR183P32249 361 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 NUP62P37198 522 aaPredicted RBP4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 RND2P52198 227 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 SELENOTP62341 195 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 EWSR1Q01844 656 aaKnown RBP eCLIP4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 SLC38A11Q08AI6 406 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 ZNF345Q14585 488 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 LRRC37A5PQ49AS3 106 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 PXDC1Q5TGL8 231 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 TEPPQ6URK8 271 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 C18orf65Q6ZTR6 163 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 ACOT7LQ6ZUV0 252 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 HAPLN4Q86UW8 402 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 TMEM190Q8WZ59 177 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 WDR89Q96FK6 387 aaPredicted RBP4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 RCC1LQ96I51 464 aaKnown RBP4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 GINS3Q9BRX5 216 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 TMEM147Q9BVK8 224 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 SLC45A2Q9UMX9 530 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 TNFSF18Q9UNG2 199 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 UFC1Q9Y3C8 167 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 LSM4Q9Y4Z0 139 aaKnown RBP4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 HSPB11Q9Y547 144 aa4.88□□□□□ -1.63
IGHV4-55-201ENST00000520889 IGKV1D-37A0A075B6S9 117 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 A0A1W2PRX2 142 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 ANKRD34BA5PLL1 514 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 PPP5D1E7EU14 171 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 TAAR5O14804 337 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 CCNKO75909 580 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 IGKV1-17P01599 117 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 TRBV12-3P01733 135 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 CD5P06127 495 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 C8orf88P0DMB2 117 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 PLP1P60201 277 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 AKR1C1Q04828 323 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 ARL16Q0P5N6 197 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 OR2F1Q13607 317 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 RAB31Q13636 194 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 ZNF266Q14584 549 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 MLANAQ16655 118 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 DEFB136Q30KP8 78 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 OR8G2PQ6IF36 304 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 TREML4Q6UXN2 200 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 ZNF546Q86UE3 836 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 AKAP14Q86UN6 197 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 LILRB2Q8N423 598 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 UBAC2Q8NBM4 344 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 INO80EQ8NBZ0 244 aaPredicted RBP4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 OR51G1Q8NGK1 321 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 OR9G4Q8NGQ1 327 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 OR5C1Q8NGR4 320 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 OR2K2Q8NGT1 345 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 Q8WTZ3 238 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 NPIPB3Q92617 1050 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 DLX4Q92988 240 aaPredicted RBP4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 ST6GAL2Q96JF0 529 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 HYLS1Q96M11 299 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 OR5B12Q96R08 314 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 CHRDL1Q9BU40 450 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 KCNIP2Q9NS61 270 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 UQCC1Q9NVA1 299 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 MRPL36Q9P0J6 103 aaKnown RBP4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 MRPL27Q9P0M9 148 aaKnown RBP4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 ZMAT5Q9UDW3 170 aaKnown RBP4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 PFDN2Q9UHV9 154 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 PAIP2BQ9ULR5 123 aaKnown RBP4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 RNF24Q9Y225 148 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 WDR83OSQ9Y284 106 aa4.87□□□□□ -1.63
IGHV4-55-201ENST00000520889 IGKV1OR2-108A0A075B7D4 117 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 IGHV3-21A0A0B4J1V1 117 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 A0A0D9SG52 128 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 A0A1W2PS18 150 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 ZFP92A6NM28 416 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 CST7O76096 145 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 TSPAN15O95858 294 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 IGHV3-23P01764 117 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 C1QBP02746 253 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 RD3LP0DJH9 198 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 CD33P20138 364 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 BMI1P35226 326 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 RPL29P47914 159 aaKnown RBP4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 AP2S1P53680 142 aaPredicted RBP4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 SLURP1P55000 103 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 DEFA5Q01523 94 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 NHLH2Q02577 135 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 Q5BKY6 102 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 C9orf66Q5T8R8 295 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 S100A7AQ86SG5 101 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 BPIFCQ8NFQ6 507 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 ACY3Q96HD9 319 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 ZNF414Q96IQ9 312 aa4.86□□□□□ -1.63
IGHV4-55-201ENST00000520889 ATP5SQ99766 215 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms