RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 WT1-ASQ06250 92 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 BATFQ16520 125 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 AAMDCQ9H7C9 122 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 ZNF785A8K8V0 405 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 UBE2CO00762 179 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 CGB3P0DN86 165 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 CGB7P0DN87 165 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 TEX45Q8NA69 505 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 EAF1Q96JC9 268 aaPredicted RBP8.22□□□□□ -1.09
MCF2-209ENST00000520602 KMT2EQ8IZD2 1858 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 TRBV24-1A0A075B6N3 115 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 TCRBV4S1A1TA0A5B7 111 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 GNG5P63218 68 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 PRNTQ86SH4 94 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 ZNF439Q8NDP4 499 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 TMEM242Q9NWH2 141 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 H0Y8G0 127 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 IL4P05112 153 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 COL8A1P27658 744 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 OR2D3Q8NGH3 330 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 CHRDL1Q9BU40 450 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 NDUFA4L2Q9NRX3 87 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 SIGLEC9Q9Y336 463 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 DSCAMO60469 2012 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 EIF4EBP1Q13541 118 aaPredicted RBP8.22□□□□□ -1.09
MCF2-209ENST00000520602 CR1LQ2VPA4 569 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 TEX38Q6PEX7 206 aa8.22□□□□□ -1.09
MCF2-209ENST00000520602 CENPVQ7Z7K6 275 aaPredicted RBP8.22□□□□□ -1.09
MCF2-209ENST00000520602 MRPL18Q9H0U6 180 aaKnown RBP8.22□□□□□ -1.09
MCF2-209ENST00000520602 BOD1L1Q8NFC6 3051 aa8.21□□□□□ -1.09
MCF2-209ENST00000520602 P01737 135 aa8.21□□□□□ -1.09
MCF2-209ENST00000520602 GNLYP22749 145 aa8.21□□□□□ -1.09
MCF2-209ENST00000520602 TPPP2P59282 170 aa8.21□□□□□ -1.09
MCF2-209ENST00000520602 NBR2O15453 112 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 NDUFS7O75251 213 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 HSBP1O75506 76 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 OR2J3O76001 311 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 CA1P00915 261 aaPredicted RBP8.21□□□□□ -1.1
MCF2-209ENST00000520602 FAM106CPP0CH98 169 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 AMTP48728 403 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 TOMM20LQ6UXN7 152 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 ZNF114Q8NC26 417 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 LINC00479Q96M42 142 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 CSPG4Q6UVK1 2322 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 ARHGAP32A7KAX9 2087 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 SOD3P08294 240 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 ZNF137PP52743 207 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 UNQ5815/PRO19632Q6UWF5 114 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 ZNF705AQ6ZN79 300 aaPredicted RBP8.21□□□□□ -1.1
MCF2-209ENST00000520602 TNFRSF14Q92956 283 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 RITA1Q96K30 269 aa8.21□□□□□ -1.1
MCF2-209ENST00000520602 TMSB15BA0A087X1C1 80 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 SERTM2A0A1B0GWG4 89 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 POU2AF1Q16633 256 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 WDR73Q6P4I2 378 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 CHODLQ9H9P2 273 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 ZNF586Q9NXT0 402 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 IGHV3OR16-13A0A075B7E8 117 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 IGHV3-74A0A0B4J1X5 117 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 HIST1H1EP10412 219 aaKnown RBP8.2□□□□□ -1.1
MCF2-209ENST00000520602 GOLT1AQ6ZVE7 132 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 BPIFA4PQ86YQ2 179 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 NAV3Q8IVL0 2385 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 PEX7O00628 323 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 IL36BQ9NZH7 164 aa8.2□□□□□ -1.1
MCF2-209ENST00000520602 E7EUB6 86 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 S100A7P31151 101 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 MFAP4P55083 255 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 RNASEKQ6P5S7 137 aaKnown RBP8.19□□□□□ -1.1
MCF2-209ENST00000520602 TMEM170AQ8WVE7 144 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 KAAG1Q9UBP8 84 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 A0A1W2PRE2 83 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 COMPP49747 757 aaPredicted RBP8.19□□□□□ -1.1
MCF2-209ENST00000520602 UNQ6494/PRO21346Q6UXR6 183 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 TMEM183AQ8IXX5 376 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 FNDC4Q9H6D8 234 aaPredicted RBP8.19□□□□□ -1.1
MCF2-209ENST00000520602 HIVEP3Q5T1R4 2406 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 PFN1P07737 140 aaKnown RBP8.19□□□□□ -1.1
MCF2-209ENST00000520602 PSG1P11464 419 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 NPPCP23582 126 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 ATP5J2P56134 94 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 SSBP2P81877 361 aaPredicted RBP8.19□□□□□ -1.1
MCF2-209ENST00000520602 IQCJQ1A5X6 159 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 TPTE2P1Q5T6R2 138 aa8.19□□□□□ -1.1
MCF2-209ENST00000520602 LSM4Q9Y4Z0 139 aaKnown RBP8.19□□□□□ -1.1
MCF2-209ENST00000520602 C22orf46C9J442 243 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 PRR31Q5SQ13 230 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 GSN-AS1Q9NRJ2 163 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 NOTCH3Q9UM47 2321 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 IGKV3-7A0A075B6H7 116 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 APCSP02743 223 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 CSN3P07498 182 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 LY6EQ16553 131 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 ASPHD1Q5U4P2 390 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 VMO1Q7Z5L0 202 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 LINC00311Q8N616 119 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 ARPC1AQ92747 370 aa8.18□□□□□ -1.1
MCF2-209ENST00000520602 IGHV3-49A0A0A0MS15 119 aa8.17□□□□□ -1.1
MCF2-209ENST00000520602 ADORA2A-AS1P86434 159 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms