RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 FAM172AQ8WUF8 416 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 AQP3Q92482 292 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 C2orf50Q96LR7 162 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 PRAP1Q96NZ9 151 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 SLC50A1Q9BRV3 221 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 OPTCQ9UBM4 332 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 NUP155O75694 1391 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 SNAPC4Q5SXM2 1469 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 SMARCA4P51532 1647 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 KIF13BQ9NQT8 1826 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 MYH11P35749 1972 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 ALPK2Q86TB3 2170 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 GLI3P10071 1580 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 IGKV1D-42A0A075B6H8 117 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 A0A087X0T9 212 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 IGKV1-9A0A0C4DH69 117 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 J3QRK9 145 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 CYB5BO43169 146 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 CST8O60676 142 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 HAND1O96004 215 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 OR4E1P0C645 316 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 ASAH2BP0C7U1 165 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 HSD11B1P28845 292 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 SRP14P37108 136 aaKnown RBP0.76□□□□□ -2.29
SKP1-207ENST00000520417 SERPINB9P50453 376 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 CDC42P60953 191 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 DEFB115Q30KQ5 88 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 SPANXN5Q5MJ07 72 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 TEX36Q5VZQ5 186 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 DEFB128Q7Z7B8 93 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 OR52L1Q8NGH7 329 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 GPR146Q96CH1 333 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 MRPL57Q9BQC6 102 aaKnown RBP0.76□□□□□ -2.29
SKP1-207ENST00000520417 NHP2Q9NX24 153 aaKnown RBP0.76□□□□□ -2.29
SKP1-207ENST00000520417 TAS2R4Q9NYW5 299 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 IDI2-AS1Q9NZ38 188 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 C22orf24Q9Y442 160 aa0.76□□□□□ -2.29
SKP1-207ENST00000520417 MAST2Q6P0Q8 1798 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 TRAV3A0A0B4J244 114 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 TRAV1-1A0A0B4J248 108 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 SULT1B1O43704 296 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 OR2B3O76000 313 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 OR2J2O76002 312 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 UBL3O95164 117 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 CTSDP07339 412 aaPredicted RBP0.75□□□□□ -2.29
SKP1-207ENST00000520417 BRS3P32247 399 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 ERVS71-1P61550 626 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 CTAG1AP78358 180 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 TAF1AQ15573 450 aaPredicted RBP0.75□□□□□ -2.29
SKP1-207ENST00000520417 LINC01554Q52M75 96 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 HACD4Q5VWC8 232 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 LCA10Q71F78 164 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 FAM19A2Q8N3H0 131 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 C12orf45Q8N5I9 185 aaPredicted RBP0.75□□□□□ -2.29
SKP1-207ENST00000520417 SIGLECL1Q8N7X8 197 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 OR11H6Q8NGC7 330 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 OR13D1Q8NGV5 346 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 OR4C6Q8NH72 309 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 C6orf62Q9GZU0 229 aaPredicted RBP0.75□□□□□ -2.29
SKP1-207ENST00000520417 MIXL1Q9H2W2 232 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 SLC35A3Q9Y2D2 325 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 HEATR5BQ9P2D3 2071 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 SCN10AQ9Y5Y9 1956 aa0.75□□□□□ -2.29
SKP1-207ENST00000520417 ROBO3Q96MS0 1386 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 HMGB3O15347 200 aaKnown RBP0.74□□□□□ -2.29
SKP1-207ENST00000520417 PROSCO94903 275 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 CLPSP04118 112 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 BAALC-AS2P0C853 105 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 COX6A1P12074 109 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 RNASE3P12724 160 aaKnown RBP0.74□□□□□ -2.29
SKP1-207ENST00000520417 ZNF93P35789 620 aaPredicted RBP0.74□□□□□ -2.29
SKP1-207ENST00000520417 CAPZBP47756 277 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 KRR1Q13601 381 aaKnown RBP0.74□□□□□ -2.29
SKP1-207ENST00000520417 BRMS1LQ5PSV4 323 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 ZNF826PQ6ZT77 177 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 CLECL1Q8IZS7 167 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 LINC00311Q8N616 119 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 OR2T35Q8NGX2 323 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 OR10X1Q8NGY0 326 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 CDC26Q8NHZ8 85 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 STAG3L4Q8TBR4 150 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 WFDC5Q8TCV5 224 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 HIST1H2BLQ99880 126 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 PSTPIP2Q9H939 334 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 PARVBQ9HBI1 364 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 EPDR1Q9UM22 224 aa0.74□□□□□ -2.29
SKP1-207ENST00000520417 POLEQ07864 2286 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 CCDC144AA2RUR9 1427 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 TECTAO75443 2155 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 A0A087WX48 190 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 C7orf71A4D174 169 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 FAM159BA6NKW6 160 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 NDUFC2O95298 119 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 CST2P09228 141 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 SRIP30626 198 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 SSR2P43308 183 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 PIGPP57054 158 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 RAB4BP61018 213 aa0.73□□□□□ -2.29
SKP1-207ENST00000520417 TEX261Q6UWH6 196 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms