RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 H3BQ15 152 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 K7EPK0 472 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 CYB5AP00167 134 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 SRP19P09132 144 aaKnown RBP4.71□□□□□ -1.66
LSM1-202ENST00000520286 LIPCP11150 499 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 ZNF708P17019 499 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 BRS3P32247 399 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 PRLHRP49683 370 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 H3F3AP84243 136 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 LOXL1Q08397 574 aaPredicted RBP4.71□□□□□ -1.66
LSM1-202ENST00000520286 EBPQ15125 230 aaKnown RBP4.71□□□□□ -1.66
LSM1-202ENST00000520286 TMEM241Q24JQ0 296 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 MPV17L2Q567V2 206 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 LINC01590Q5TEZ4 76 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 SH2D6Q7Z4S9 175 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 LYPD6Q86Y78 171 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 PLPP5Q8NEB5 264 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 OR4S1Q8NGB4 309 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 OR51D1Q8NGF3 324 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 OR8S1Q8NH09 359 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 OR4C6Q8NH72 309 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 PFN4Q8NHR9 129 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 SKA2Q8WVK7 121 aaPredicted RBP4.71□□□□□ -1.66
LSM1-202ENST00000520286 FAM19A4Q96LR4 140 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 ZNF488Q96MN9 340 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 OR2M4Q96R27 311 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 NDFIP1Q9BT67 221 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 FAAP24Q9BTP7 215 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 OR2S2Q9NQN1 319 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 CBLN4Q9NTU7 201 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 ZNRD1Q9P1U0 126 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 ZFP30Q9Y2G7 519 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 SIGLEC9Q9Y336 463 aa4.71□□□□□ -1.66
LSM1-202ENST00000520286 LAMA1P25391 3075 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 TMEM212A6NML5 194 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 ZNF727A8MUV8 499 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 HSBP1L1C9JCN9 74 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 FTCDNL1E5RQL4 147 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 K7EN84 100 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 CYB5BO43169 146 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 HMGN2P05204 90 aaKnown RBP4.7□□□□□ -1.66
LSM1-202ENST00000520286 GYPBP06028 91 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 OR4A8P0C604 315 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 SLC35G6P0C7Q6 338 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 GABRA4P48169 554 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 SPINT3P49223 89 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 IDH3GP51553 393 aaPredicted RBP4.7□□□□□ -1.66
LSM1-202ENST00000520286 MLF1P58340 268 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 REEP5Q00765 189 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 IQCJQ1A5X6 159 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 TMEM128Q5BJH2 165 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 PDZD11Q5EBL8 140 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 AADACL3Q5VUY0 350 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 CLEC18BQ6UXF7 455 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 HMGN2P46Q86SG4 172 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 SLC35G3Q8N808 338 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 Q8N9L7 120 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 CYB561A3Q8NBI2 242 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 OR4X1Q8NH49 305 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 ACY3Q96HD9 319 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 Q96M85 177 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 GPX7Q96SL4 187 aaPredicted RBP4.7□□□□□ -1.66
LSM1-202ENST00000520286 TTTY10Q9BZA0 68 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 WFDC1Q9HC57 220 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 MRM2Q9UI43 246 aaKnown RBP4.7□□□□□ -1.66
LSM1-202ENST00000520286 DKKL1Q9UK85 242 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 PSG11Q9UQ72 335 aa4.7□□□□□ -1.66
LSM1-202ENST00000520286 PIEZO2Q9H5I5 2752 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 IGKV1-27A0A075B6S5 117 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 IGHV2OR16-5A0A0B4J2B6 119 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 DEDDO75618 318 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 APCSP02743 223 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 HIST1H1CP16403 213 aaKnown RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 RPL12P30050 165 aaKnown RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 PPP1CCP36873 323 aaKnown RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 KLF3P57682 345 aaPredicted RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 RPS20P60866 119 aaKnown RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 UBE2KP61086 200 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 SUPT4H1P63272 117 aaKnown RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 ARHGAP11BQ3KRB8 267 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 ZFP2Q6ZN57 461 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 LHFPL1Q86WI0 220 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 OR4D6Q8NGJ1 314 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 CASTOR1Q8WTX7 329 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 ORAOV1Q8WV07 137 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 TMEM106AQ96A25 262 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 TMEM159Q96B96 161 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 TVP23CQ96ET8 276 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 CYYR1Q96J86 154 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 OR10C1Q96KK4 312 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 MIEN1Q9BRT3 115 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 ZNF2Q9BSG1 426 aaPredicted RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 EMC6Q9BV81 110 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 NUDT9Q9BW91 350 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 ULBP2Q9BZM5 246 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 EIF5A2Q9GZV4 153 aaKnown RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 FGF23Q9GZV9 251 aaPredicted RBP4.69□□□□□ -1.66
LSM1-202ENST00000520286 MED31Q9Y3C7 131 aa4.69□□□□□ -1.66
LSM1-202ENST00000520286 PUS1Q9Y606 427 aaKnown RBP eCLIP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms