RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 NXF2Q9GZY0 626 aaKnown RBP5.19□□□□□ -1.58
SDCBP-208ENST00000520228 FXYD6Q9H0Q3 95 aa5.19□□□□□ -1.58
SDCBP-208ENST00000520228 HRASLSQ9HDD0 168 aa5.19□□□□□ -1.58
SDCBP-208ENST00000520228 G3V4G9 280 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 K7EQG2 157 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 GSTZ1O43708 216 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-208ENST00000520228 KBTBD11O94819 623 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 S1PR2O95136 353 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 TRGV3P03979 118 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 CD74P04233 296 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 APELAP0DMC3 54 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 PGAM2P15259 253 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 IGLL1P15814 213 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 F2RP25116 425 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 S100A5P33763 92 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 MAS1LP35410 378 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 LPAR6P43657 344 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 RAB25P57735 213 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 TPPP2P59282 170 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 TAS2R31P59538 309 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 RPL8P62917 257 aaKnown RBP5.18□□□□□ -1.58
SDCBP-208ENST00000520228 MEF2DQ14814 521 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 DEFB136Q30KP8 78 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 SCGB2B2Q4G0G5 96 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 C10orf55Q5SWW7 151 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 PUSL1Q8N0Z8 303 aaKnown RBP5.18□□□□□ -1.58
SDCBP-208ENST00000520228 OR1N2Q8NGR9 330 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 OR4A5Q8NH83 315 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 TERB2Q8NHR7 220 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 TMEM167AQ8TBQ9 72 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 SOSTQ9BQB4 213 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 GNB4Q9HAV0 340 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 COMMD9Q9P000 198 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 NDUFA13Q9P0J0 144 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 NOTCH3Q9UM47 2321 aa5.18□□□□□ -1.58
SDCBP-208ENST00000520228 A0A0G2JLM5 398 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 DISC1C4P0D8 188 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 H3BUA1 57 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 I3L521 148 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 UPK2O00526 184 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 KRASP01116 189 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 SERPINE2P07093 398 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 OR9G9P0C7N8 305 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 AKAIN1P0CW23 69 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 RPA2P15927 270 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 HLA-GP17693 338 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 RPL27AP46776 148 aaKnown RBP5.17□□□□□ -1.58
SDCBP-208ENST00000520228 NDUFV3P56181 108 aaKnown RBP5.17□□□□□ -1.58
SDCBP-208ENST00000520228 RUNX1Q01196 453 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 CD300CQ08708 224 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 POU2AF1Q16633 256 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 AARDQ4LEZ3 155 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 PYDC2Q56P42 97 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 KPRPQ5T749 579 aaPredicted RBP5.17□□□□□ -1.58
SDCBP-208ENST00000520228 SLC25A42Q86VD7 318 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 LHFPL1Q86WI0 220 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 OR11H1Q8NG94 326 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 ZFAND1Q8TCF1 268 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 SLC2A9Q9NRM0 540 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 COA4Q9NYJ1 87 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 BET1LQ9NYM9 111 aa5.17□□□□□ -1.58
SDCBP-208ENST00000520228 TRAV3A0A0B4J244 114 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 ANKRD20A5PA0PJZ0 165 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 SNAPC5O75971 98 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 BRI3O95415 125 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 IGHV3-11P01762 117 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 HSPB1P04792 205 aaKnown RBP5.16□□□□□ -1.58
SDCBP-208ENST00000520228 LGALS1P09382 135 aaKnown RBP5.16□□□□□ -1.58
SDCBP-208ENST00000520228 OR8U8P0C7N1 319 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 ZNF735P0CB33 412 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 GATA1P15976 413 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-208ENST00000520228 G6PCP35575 357 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 FHITP49789 147 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 PIGPP57054 158 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 RND3P61587 244 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 ZNF616Q08AN1 781 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 RIGQ13278 110 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 SPANXN2Q5MJ10 180 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 Q8N402 240 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 TTC9CQ8N5M4 171 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 OR4C16Q8NGL9 310 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 OR13C8Q8NGS7 320 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 MARCH1Q8TCQ1 289 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 USMG5Q96IX5 58 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 GPR61Q9BZJ8 451 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 COMMD5Q9GZQ3 224 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 ALX4Q9H161 411 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-208ENST00000520228 FAM212BQ9NTI7 297 aaPredicted RBP5.16□□□□□ -1.58
SDCBP-208ENST00000520228 COPZ2Q9P299 210 aa5.16□□□□□ -1.58
SDCBP-208ENST00000520228 TET2Q6N021 2002 aaPredicted RBP5.15□□□□□ -1.58
SDCBP-208ENST00000520228 C3orf85A0A1B0GTC6 90 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 A0A1B0GW64 132 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 E7EUB6 86 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 LINC01619G3V211 115 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 H0Y980 276 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 CCSO14618 274 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 DHFRP00374 187 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 PRH1P02810 166 aa5.15□□□□□ -1.59
SDCBP-208ENST00000520228 CTSDP07339 412 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms