RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 C4BPBP20851 252 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 UCP1P25874 307 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 RPL5P46777 297 aaKnown RBP11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 HOXA1P49639 335 aaPredicted RBP11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 RPL11P62913 178 aaKnown RBP11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 SP6Q3SY56 376 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 AARDQ4LEZ3 155 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 CLVS1Q8IUQ0 354 aaPredicted RBP11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 STHQ8IWL8 128 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 RNASE11Q8TAA1 199 aaKnown RBP11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 DIRAS2Q96HU8 199 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 PRRT1Q99946 306 aa11.35□□□□□ -0.59
CSGALNACT1-208ENST00000520003 IGHV4-4A0A075B6R2 117 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 IGHV4-28A0A0C4DH34 117 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 ZNF705EA8MWA4 302 aaPredicted RBP11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 HLA-DMBP28068 263 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 OPRK1P41145 380 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 P2RY1P47900 373 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 DHODHQ02127 395 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 IL18Q14116 193 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 Q6ZRM9 215 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 Q6ZTC4 211 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 STXBP6Q8NFX7 210 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 SMIM4Q8WVI0 70 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 METTL26Q96S19 204 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 SCP2D1Q9UJQ7 156 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 KCNIP3Q9Y2W7 256 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 U3KQE9 123 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 X6R8D5 127 aa11.34□□□□□ -0.59
CSGALNACT1-208ENST00000520003 TRAV10A0A0B4J240 114 aa11.33□□□□□ -0.6
CSGALNACT1-208ENST00000520003 TEX13DA0A0J9YY54 714 aaPredicted RBP11.33□□□□□ -0.6
CSGALNACT1-208ENST00000520003 RTL8CO15255 209 aa11.33□□□□□ -0.6
CSGALNACT1-208ENST00000520003 AKAIN1P0CW23 69 aa11.33□□□□□ -0.6
CSGALNACT1-208ENST00000520003 TIGITQ495A1 244 aa11.33□□□□□ -0.6
CSGALNACT1-208ENST00000520003 TMEM41BQ5BJD5 291 aa11.33□□□□□ -0.6
CSGALNACT1-208ENST00000520003 OR13C8Q8NGS7 320 aa11.33□□□□□ -0.6
CSGALNACT1-208ENST00000520003 RNF126Q9BV68 326 aa11.33□□□□□ -0.6
CSGALNACT1-208ENST00000520003 PKD1P98161 4303 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 CTDSP2O14595 271 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 SPP1P10451 314 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 MIFP14174 115 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 MORN3Q6PF18 240 aaPredicted RBP11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 NOXA1Q86UR1 476 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 CSNK1G2-AS1Q8NCQ2 148 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 LHFPL5Q8TAF8 219 aa11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
CSGALNACT1-208ENST00000520003 MUC4Q99102 2169 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 ELOA3CA0A087WX78 387 aaPredicted RBP11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 PRSS29PA6NIE9 313 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 GSTZ1O43708 216 aaPredicted RBP11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 CDS2O95674 445 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 AMBPP02760 352 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 IGLC1P0CG04 106 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 FAUP35544 74 aaKnown RBP11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 SPCS3P61009 180 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 SPCS2Q15005 226 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 OR52E5Q8NH55 327 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 MARCH1Q8TCQ1 289 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 DYNC2LI1Q8TCX1 351 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 GLYATL2Q8WU03 294 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 TMEM230Q96A57 120 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 TMEM222Q9H0R3 208 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 MIXL1Q9H2W2 232 aa11.31□□□□□ -0.6
CSGALNACT1-208ENST00000520003 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 OR5AC1P0C628 307 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 HTR2BP41595 481 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 AP3S2P59780 193 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 PRSS54Q6PEW0 395 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 C16orf54Q6UWD8 224 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 POM121L12Q8N7R1 296 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 TMEM170AQ8WVE7 144 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 GLMPQ8WWB7 406 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 RBPMSQ93062 196 aaKnown RBP11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 KRTAP4-5Q9BYR2 181 aa11.3□□□□□ -0.6
CSGALNACT1-208ENST00000520003 RPS10-NUDT3A0A1W2PQS6 291 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 FABP12A6NFH5 140 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 ANXA3P12429 323 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 C2orf83Q53S99 150 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 ACTL10Q5JWF8 245 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 OR1S2Q8NGQ3 325 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 DEDD2Q8WXF8 326 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 IL22RA2Q969J5 263 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 NARS2Q96I59 477 aaKnown RBP11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 RTBDNQ9BSG5 229 aaPredicted RBP11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
CSGALNACT1-208ENST00000520003 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 RND2P52198 227 aa11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 YPEL3P61236 119 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 SRPXP78539 464 aa11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 ETFRF1Q6IPR1 90 aa11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 FAAP20Q6NZ36 180 aa11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 SELENOHQ8IZQ5 122 aaKnown RBP11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 RNASEH2CQ8TDP1 164 aaKnown RBP11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
CSGALNACT1-208ENST00000520003 CELA1Q9UNI1 258 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms