RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SMDT1Q9H4I9 107 aa5.93□□□□□ -1.46
SDCBP-206ENST00000519115 GAR1Q9NY12 217 aaKnown RBP5.93□□□□□ -1.46
SDCBP-206ENST00000519115 TRRAPQ9Y4A5 3859 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 NOTCH1P46531 2555 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 TRAV30A0A087WSZ9 112 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 IGHV7-81A0A0B4J1V7 117 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 A0A1B0GW64 132 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 E7EUB6 86 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 G3V318 75 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 TEX46H3BTG2 121 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 OPN1MWP04001 364 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 FABP1P07148 127 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 OPN1MW2P0DN77 364 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 OPN1MW3P0DN78 364 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 ATP6V0CP27449 155 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 OPRK1P41145 380 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 SLC35B1P78383 322 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 ECSCRQ19T08 205 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 SLC25A24Q6NUK1 477 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 C18orf65Q6ZTR6 163 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 S100A7AQ86SG5 101 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 NDUFA11Q86Y39 141 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 VN1R17PQ8TDU5 208 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 HINT2Q9BX68 163 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 RNF24Q9Y225 148 aa5.92□□□□□ -1.46
SDCBP-206ENST00000519115 TRBV9A0A0B4J1U6 114 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 RAB19A4D1S5 217 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 ANKRD34BA5PLL1 514 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 H3BP45 60 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 SCGB2A1O75556 95 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 NMBP08949 121 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 EGR2P11161 476 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-206ENST00000519115 S100A7P31151 101 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 TAGLN2P37802 199 aaKnown RBP5.91□□□□□ -1.46
SDCBP-206ENST00000519115 CAMLGP49069 296 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 GNB1P62873 340 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 GAMTQ14353 236 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 CLINT1Q14677 625 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 C19orf54Q5BKX5 351 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 OR8G2PQ6IF36 304 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 BTNL8Q6UX41 500 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 THAP8Q8NA92 274 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 LFNGQ8NES3 379 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 OR10W1Q8NGF6 305 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 OR4X1Q8NH49 305 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 MBD3L1Q8WWY6 194 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 SLC35E1Q96K37 410 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 RNF2Q99496 336 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 FAM103A1Q9BTL3 118 aaKnown RBP5.91□□□□□ -1.46
SDCBP-206ENST00000519115 NPCDR1Q9BY65 106 aa5.91□□□□□ -1.46
SDCBP-206ENST00000519115 TSSC4Q9Y5U2 329 aaPredicted RBP5.91□□□□□ -1.46
SDCBP-206ENST00000519115 IGLV11-55A0A075B6I3 123 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 TRAV41A0A0B4J266 112 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 I3L2K1 104 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 NXPH3O95157 252 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 HBE1P02100 147 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 PF4V1P10720 104 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 DEFA4P12838 97 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 M6PRP20645 277 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 NPBWR1P48145 328 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 PLP1P60201 277 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 RAB2AP61019 212 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 CFHR3Q02985 330 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 ACOT6Q3I5F7 207 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-206ENST00000519115 AKR1C8PQ5T2L2 129 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 TEX38Q6PEX7 206 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 ALKAL2Q6UX46 152 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 IL34Q6ZMJ4 242 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 NECAP1Q8NC96 275 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 KLHL30-AS1Q8NEE0 82 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 OR4F17Q8NGA8 305 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 SUN5Q8TC36 379 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 TMED6Q8WW62 240 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 BSCL2Q96G97 398 aaPredicted RBP5.9□□□□□ -1.46
SDCBP-206ENST00000519115 USMG5Q96IX5 58 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 CXorf58Q96LI9 332 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 OR4F4Q96R69 305 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 TRGV9Q99603 122 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 SMIM3Q9BZL3 60 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 SLC45A2Q9UMX9 530 aa5.9□□□□□ -1.46
SDCBP-206ENST00000519115 ELOA3CA0A087WX78 387 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-206ENST00000519115 FAM223BA6NKX1 122 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 SEC14L6B5MCN3 397 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 IGHG4P01861 327 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 PF4P02776 101 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 APELAP0DMC3 54 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 AREGP15514 252 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 PPT1P50897 306 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 YPEL3P61236 119 aaPredicted RBP5.89□□□□□ -1.47
SDCBP-206ENST00000519115 FOXE3Q13461 319 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 DEFB136Q30KP8 78 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 TMEM41BQ5BJD5 291 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 UQCC3Q6UW78 93 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 UNQ5815/PRO19632Q6UWF5 114 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 Q6ZRG5 221 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 C8orf86Q6ZUL3 223 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 SLC16A13Q7RTY0 426 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 C1QL4Q86Z23 238 aa5.89□□□□□ -1.47
SDCBP-206ENST00000519115 FAM223AQ8IWN6 122 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms