RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SRD5A3Q9H8P0 318 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 LINC00854A0A1B0GVQ3 168 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 A0A1W2PS18 150 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 PLA2G10O15496 165 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 ZNF207O43670 478 aaKnown RBP9.55□□□□□ -0.88
CLCN3-210ENST00000515420 IGLC1P0CG04 106 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 OR10J1P30954 320 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 GGNBP1Q5YKI7 109 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 RNF2Q99496 336 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 TMEM231Q9H6L2 316 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 FLVCR2Q9UPI3 526 aa9.55□□□□□ -0.88
CLCN3-210ENST00000515420 SYNGR2O43760 224 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 IFNA21P01568 189 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 IFNA4P05014 189 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 HOXB5P09067 269 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 NPPCP23582 126 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 CRYBB3P26998 211 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 GPX4P36969 197 aaPredicted RBP9.54□□□□□ -0.88
CLCN3-210ENST00000515420 CMC4P56277 68 aaPredicted RBP9.54□□□□□ -0.88
CLCN3-210ENST00000515420 RPP30P78346 268 aaKnown RBP9.54□□□□□ -0.88
CLCN3-210ENST00000515420 C4orf46Q504U0 113 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 FAM90A2PQ658T7 463 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 METTL26Q96S19 204 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 WFDC10AQ9H1F0 79 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 C20orf85Q9H1P6 137 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 PTTG2Q9NZH5 202 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 SELENOKQ9Y6D0 94 aa9.54□□□□□ -0.88
CLCN3-210ENST00000515420 TENM3Q9P273 2699 aa9.53□□□□□ -0.88
CLCN3-210ENST00000515420 TRAV2A0A0B4J234 112 aa9.53□□□□□ -0.88
CLCN3-210ENST00000515420 RBMY1BA6NDE4 496 aaKnown RBP9.53□□□□□ -0.88
CLCN3-210ENST00000515420 RBMY1EA6NEQ0 496 aaKnown RBP9.53□□□□□ -0.88
CLCN3-210ENST00000515420 TCRBP04435 133 aa9.53□□□□□ -0.88
CLCN3-210ENST00000515420 RBMY1DP0C7P1 496 aaKnown RBP9.53□□□□□ -0.88
CLCN3-210ENST00000515420 ANXA7P20073 488 aaKnown RBP9.53□□□□□ -0.88
CLCN3-210ENST00000515420 RAB11AP62491 216 aa9.53□□□□□ -0.88
CLCN3-210ENST00000515420 TIGITQ495A1 244 aa9.53□□□□□ -0.88
CLCN3-210ENST00000515420 Q8WTZ3 238 aa9.53□□□□□ -0.88
CLCN3-210ENST00000515420 ST8SIA2Q92186 375 aa9.53□□□□□ -0.88
CLCN3-210ENST00000515420 NPIPB3Q92617 1050 aa9.53□□□□□ -0.88
CLCN3-210ENST00000515420 NARS2Q96I59 477 aaKnown RBP9.53□□□□□ -0.88
CLCN3-210ENST00000515420 HUWE1Q7Z6Z7 4374 aaKnown RBP9.52□□□□□ -0.89
CLCN3-210ENST00000515420 ADAP1O75689 374 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 TOMM40O96008 361 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 PAFAH1B2P68402 229 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 ID3Q02535 119 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 ODF3L2Q3SX64 289 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 TCF24Q7RTU0 167 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 MITD1Q8WV92 249 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 ACY3Q96HD9 319 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 SLC35E1Q96K37 410 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 CITED4Q96RK1 184 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 GGTLC1Q9BX51 225 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 WDR12Q9GZL7 423 aaKnown RBP9.52□□□□□ -0.89
CLCN3-210ENST00000515420 BATF3Q9NR55 127 aa9.52□□□□□ -0.89
CLCN3-210ENST00000515420 LOC102724200A0A096LPH7 203 aaPredicted RBP9.51□□□□□ -0.89
CLCN3-210ENST00000515420 IGHV3-49A0A0A0MS15 119 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 LCE2BO14633 110 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 FABP1P07148 127 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 IAPPP10997 89 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 NKX2-1P43699 371 aaPredicted RBP9.51□□□□□ -0.89
CLCN3-210ENST00000515420 GAMTQ14353 236 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 OR4D5Q8NGN0 318 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 GRAMD2BQ96HH9 432 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 NUDT15Q9NV35 164 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 U3KQE9 123 aa9.51□□□□□ -0.89
CLCN3-210ENST00000515420 IGHV3OR16-13A0A075B7E8 117 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 IGHV3-74A0A0B4J1X5 117 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 PRSS46E5RG02 174 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 C3orf84H3BNL1 204 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 WRBO00258 174 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 DFFBO76075 338 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 APOHP02749 345 aaPredicted RBP9.5□□□□□ -0.89
CLCN3-210ENST00000515420 HNRNPCP07910 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
CLCN3-210ENST00000515420 RD3LP0DJH9 198 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 NUP62P37198 522 aaPredicted RBP9.5□□□□□ -0.89
CLCN3-210ENST00000515420 EIF2B2P49770 351 aaKnown RBP9.5□□□□□ -0.89
CLCN3-210ENST00000515420 ASAH1Q13510 395 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
CLCN3-210ENST00000515420 KIR2DL5BA0A0G2JN68 375 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 KIR2DL5BA0A0G2JPC4 375 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 ZFP92A6NM28 416 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 MPTX1A8MV57 137 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 IL4P05112 153 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 P2RY1P47900 373 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 APOC4P55056 127 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 ZNF846Q147U1 533 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 OR8G2PQ6IF36 304 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 KIR2DL5AQ8N109 375 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 LILRB2Q8N423 598 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 OR51G1Q8NGK1 321 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 KIR2DL5BQ8NHK3 375 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 TRGV9Q99603 122 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 MAGT1Q9H0U3 335 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 MS4A6AQ9H2W1 248 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 UBQLN2Q9UHD9 624 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 TBC1D24Q9ULP9 559 aa9.49□□□□□ -0.89
CLCN3-210ENST00000515420 STRAPQ9Y3F4 350 aaKnown RBP9.49□□□□□ -0.89
CLCN3-210ENST00000515420 NBEAL2Q6ZNJ1 2754 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
CLCN3-210ENST00000515420 FAM240BA0A1B0GVZ2 78 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms