RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 TMEM170AQ8WVE7 144 aa9.4□□□□□ -0.9
PTCD2-210ENST00000515198 ZNF414Q96IQ9 312 aa9.4□□□□□ -0.9
PTCD2-210ENST00000515198 NEURL2Q9BR09 285 aa9.4□□□□□ -0.9
PTCD2-210ENST00000515198 TUBA4BQ9H853 241 aa9.4□□□□□ -0.9
PTCD2-210ENST00000515198 SMPXQ9UHP9 88 aa9.4□□□□□ -0.9
PTCD2-210ENST00000515198 PUS1Q9Y606 427 aaKnown RBP eCLIP9.4□□□□□ -0.9
PTCD2-210ENST00000515198 DNAH3Q8TD57 4116 aa9.4□□□□□ -0.91
PTCD2-210ENST00000515198 OR10J1P30954 320 aa9.39□□□□□ -0.91
PTCD2-210ENST00000515198 NKX2-1P43699 371 aaPredicted RBP9.39□□□□□ -0.91
PTCD2-210ENST00000515198 SLC16A13Q7RTY0 426 aa9.39□□□□□ -0.91
PTCD2-210ENST00000515198 ENKURQ8TC29 256 aa9.39□□□□□ -0.91
PTCD2-210ENST00000515198 SLC35E1Q96K37 410 aa9.39□□□□□ -0.91
PTCD2-210ENST00000515198 ASCL2Q99929 193 aa9.39□□□□□ -0.91
PTCD2-210ENST00000515198 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
PTCD2-210ENST00000515198 MAGT1Q9H0U3 335 aa9.39□□□□□ -0.91
PTCD2-210ENST00000515198 ZFAND3Q9H8U3 227 aa9.39□□□□□ -0.91
PTCD2-210ENST00000515198 PAIP2BQ9ULR5 123 aaKnown RBP9.39□□□□□ -0.91
PTCD2-210ENST00000515198 MPTX1A8MV57 137 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 CHEK1O14757 476 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 TSPAN4O14817 238 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 IGKV1-17P01599 117 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 CD7P09564 240 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 IGLC1P0CG04 106 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 GPX4P36969 197 aaPredicted RBP9.38□□□□□ -0.91
PTCD2-210ENST00000515198 YPEL3P61236 119 aaPredicted RBP9.38□□□□□ -0.91
PTCD2-210ENST00000515198 ID3Q02535 119 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 IAH1Q2TAA2 248 aaPredicted RBP9.38□□□□□ -0.91
PTCD2-210ENST00000515198 TIGITQ495A1 244 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 ZNF431Q8TF32 576 aaPredicted RBP9.38□□□□□ -0.91
PTCD2-210ENST00000515198 NPIPB3Q92617 1050 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 ACY3Q96HD9 319 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 SPAG8Q99932 426 aaPredicted RBP9.38□□□□□ -0.91
PTCD2-210ENST00000515198 TMEM231Q9H6L2 316 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 C19orf73Q9NVV2 129 aa9.38□□□□□ -0.91
PTCD2-210ENST00000515198 IGHV3-49A0A0A0MS15 119 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 SCGB1D2O95969 90 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 CD5P06127 495 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 NPPCP23582 126 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 DEFA1P59665 94 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 DEFA3P59666 94 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 SPANXN5Q5MJ07 72 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 SBSPONQ8IVN8 264 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 OR4D5Q8NGN0 318 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 Q8WTZ3 238 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 NARS2Q96I59 477 aaKnown RBP9.37□□□□□ -0.91
PTCD2-210ENST00000515198 METTL26Q96S19 204 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 SEC22CQ9BRL7 303 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 STRAPQ9Y3F4 350 aaKnown RBP9.37□□□□□ -0.91
PTCD2-210ENST00000515198 TGP01266 2768 aa9.37□□□□□ -0.91
PTCD2-210ENST00000515198 IGHV3OR16-13A0A075B7E8 117 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 IGHV3-74A0A0B4J1X5 117 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 A0A1W2PS18 150 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 OR4C46A6NHA9 309 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 OR11H12B2RN74 326 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 SSSCA1O60232 199 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 TOMM40O96008 361 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 POLR2GP62487 172 aaKnown RBP eCLIP9.36□□□□□ -0.91
PTCD2-210ENST00000515198 IFITM3Q01628 133 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 C12orf45Q8N5I9 185 aaPredicted RBP9.36□□□□□ -0.91
PTCD2-210ENST00000515198 ZBTB8BQ8NAP8 495 aaPredicted RBP9.36□□□□□ -0.91
PTCD2-210ENST00000515198 RNF2Q99496 336 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 VSIRQ9H7M9 311 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 PSENENQ9NZ42 101 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 GSKIPQ9P0R6 139 aa9.36□□□□□ -0.91
PTCD2-210ENST00000515198 PRKDCP78527 4128 aaKnown RBP9.35□□□□□ -0.91
PTCD2-210ENST00000515198 C5orf51A6NDU8 294 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 FAM25EA8MYX2 175 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 H3BP45 60 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 IL5P05113 134 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 FABP1P07148 127 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 RD3LP0DJH9 198 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 CRYBB3P26998 211 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 GAMTQ14353 236 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 DEFB125Q8N687 156 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 GRAMD2BQ96HH9 432 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 ZMAT4Q9H898 229 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 SRD5A3Q9H8P0 318 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 GPN1Q9HCN4 374 aaPredicted RBP9.35□□□□□ -0.91
PTCD2-210ENST00000515198 U3KQK5 164 aa9.35□□□□□ -0.91
PTCD2-210ENST00000515198 CCSO14618 274 aa9.34□□□□□ -0.91
PTCD2-210ENST00000515198 APOHP02749 345 aaPredicted RBP9.34□□□□□ -0.91
PTCD2-210ENST00000515198 IL4P05112 153 aa9.34□□□□□ -0.91
PTCD2-210ENST00000515198 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
PTCD2-210ENST00000515198 PAFAH1B2P68402 229 aa9.34□□□□□ -0.91
PTCD2-210ENST00000515198 TCF24Q7RTU0 167 aa9.34□□□□□ -0.91
PTCD2-210ENST00000515198 ST8SIA2Q92186 375 aa9.34□□□□□ -0.91
PTCD2-210ENST00000515198 SMIM8Q96KF7 97 aa9.34□□□□□ -0.91
PTCD2-210ENST00000515198 RAB40CQ96S21 281 aa9.34□□□□□ -0.91
PTCD2-210ENST00000515198 WFDC10AQ9H1F0 79 aa9.34□□□□□ -0.91
PTCD2-210ENST00000515198 IGKV3-7A0A075B6H7 116 aa9.33□□□□□ -0.92
PTCD2-210ENST00000515198 IGHV3-66A0A0C4DH42 116 aa9.33□□□□□ -0.92
PTCD2-210ENST00000515198 PRAF2O60831 178 aa9.33□□□□□ -0.92
PTCD2-210ENST00000515198 PSG1P11464 419 aa9.33□□□□□ -0.92
PTCD2-210ENST00000515198 CMC4P56277 68 aaPredicted RBP9.33□□□□□ -0.92
PTCD2-210ENST00000515198 TAS2R30P59541 319 aa9.33□□□□□ -0.92
PTCD2-210ENST00000515198 RPL11P62913 178 aaKnown RBP9.33□□□□□ -0.92
PTCD2-210ENST00000515198 FAM90A2PQ658T7 463 aa9.33□□□□□ -0.92
PTCD2-210ENST00000515198 GSG1LQ6UXU4 331 aa9.33□□□□□ -0.92
PTCD2-210ENST00000515198 NRARPQ7Z6K4 114 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms