RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SHPKQ9UHJ6 478 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 V9GYH0 126 aa7.7□□□□□ -1.18
HMGXB3-205ENST00000514469 NXPH3O95157 252 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 IGLC1P0CG04 106 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 NPPCP23582 126 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 NPY1RP25929 384 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 RND2P52198 227 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 SRPXP78539 464 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 FAM24BQ8N5W8 94 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 OR1S2Q8NGQ3 325 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 METTL26Q96S19 204 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 CSTL1Q9H114 145 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 HSPB7Q9UBY9 170 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 KCNIP3Q9Y2W7 256 aa7.69□□□□□ -1.18
HMGXB3-205ENST00000514469 A0A1W2PS18 150 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 MPTX1A8MV57 137 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 DNASE2O00115 360 aaPredicted RBP7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 AKR1C4P17516 323 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 OR10J1P30954 320 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 FAUP35544 74 aaKnown RBP7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 P2RY1P47900 373 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 CCR6P51684 374 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 AP3S2P59780 193 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 YPEL3P61236 119 aaPredicted RBP7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 SMCO1Q147U7 214 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 ZNF79Q15937 498 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 LYZL2Q7Z4W2 148 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 DTD1Q8TEA8 209 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 GATAD1Q8WUU5 269 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 RBM38Q9H0Z9 239 aaKnown RBP7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 U3KQE9 123 aa7.68□□□□□ -1.18
HMGXB3-205ENST00000514469 DUXBA0A1W2PPF3 345 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 CXorf65A6NEN9 183 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 NUPR2A6NF83 97 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 K7EQG2 157 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 HNRNPCP07910 306 aaKnown RBP eCLIP7.67□□□□□ -1.181e-6■■□□□ 12
HMGXB3-205ENST00000514469 ANXA3P12429 323 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 DEFB131AP59861 70 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 RPL11P62913 178 aaKnown RBP7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 PMS2P11Q13670 270 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 PYDC2Q56P42 97 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 LEMD1Q68G75 181 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 ETFRF1Q6IPR1 90 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 CCDC190Q86UF4 302 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 NOXA1Q86UR1 476 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 LGI3Q8N145 548 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 TOMM5Q8N4H5 51 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 DCANP1Q8TF63 244 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 DEDD2Q8WXF8 326 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 GRAMD2BQ96HH9 432 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 NARS2Q96I59 477 aaKnown RBP7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 RBKSQ9H477 322 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 RABAC1Q9UI14 185 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 U3KQ87 197 aa7.67□□□□□ -1.18
HMGXB3-205ENST00000514469 BIRC6Q9NR09 4857 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 PIGBOS1A0A0B4J2F0 54 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 TOMM40O96008 361 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 CA1P00915 261 aaPredicted RBP7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 IFNA10P01566 189 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 IL4P05112 153 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 RBMS2Q15434 407 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 USF2Q15853 346 aaPredicted RBP7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 TMEM128Q5BJH2 165 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 C16orf54Q6UWD8 224 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 TMED4Q7Z7H5 227 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 TMEM217Q8N7C4 229 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 LRTM2Q8N967 370 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 STXBP6Q8NFX7 210 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 Q8WTZ3 238 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 GLMPQ8WWB7 406 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 LINC00476Q8WZB0 136 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 NPIPB3Q92617 1050 aa7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 C11orf68Q9H3H3 251 aaKnown RBP7.66□□□□□ -1.18
HMGXB3-205ENST00000514469 HELTA6NFD8 242 aa7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 CCDC160A6NGH7 325 aa7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 PITX3O75364 302 aa7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 S100A5P33763 92 aa7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 EIF2B2P49770 351 aaKnown RBP7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 ATP5IP56385 69 aaPredicted RBP7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 CEMP1Q6PRD7 247 aaPredicted RBP7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 TRPT1Q86TN4 253 aaKnown RBP7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 OR1S1Q8NH92 325 aa7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 ACY3Q96HD9 319 aa7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 RARRES2Q99969 163 aa7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 SLC25A21Q9BQT8 299 aaPredicted RBP7.65□□□□□ -1.18
HMGXB3-205ENST00000514469 ZNF701M0R085 212 aaPredicted RBP7.64□□□□□ -1.19
HMGXB3-205ENST00000514469 ZNF688P0C7X2 276 aa7.64□□□□□ -1.19
HMGXB3-205ENST00000514469 RD3LP0DJH9 198 aa7.64□□□□□ -1.19
HMGXB3-205ENST00000514469 SLC25A6P12236 298 aa7.64□□□□□ -1.19
HMGXB3-205ENST00000514469 STHQ8IWL8 128 aa7.64□□□□□ -1.19
HMGXB3-205ENST00000514469 OR11H2Q8NH07 326 aa7.64□□□□□ -1.19
HMGXB3-205ENST00000514469 SRRQ9GZT4 340 aa7.64□□□□□ -1.19
HMGXB3-205ENST00000514469 IGKV1D-37A0A075B6S9 117 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 FAM90A26D6RGX4 464 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 BUB3O43684 328 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 GIG44P09565 113 aaPredicted RBP7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 SPP1P10451 314 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 PSG1P11464 419 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 C4BPBP20851 252 aa7.63□□□□□ -1.19
HMGXB3-205ENST00000514469 VAMP1P23763 118 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms