RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 ATP6V1G1O75348 118 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 OR2J3O76001 311 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 NDUFB8O95169 186 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 CD99P14209 185 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 FCGR2BP31994 310 aaPredicted RBP12.55□□□□□ -0.4
NUP54-214ENST00000514307 RHOGP84095 191 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 PEA15Q15121 130 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 C19orf35Q6ZS72 473 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 FAM223AQ8IWN6 122 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 RCC1LQ96I51 464 aaKnown RBP12.55□□□□□ -0.4
NUP54-214ENST00000514307 USMG5Q96IX5 58 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 VSIRQ9H7M9 311 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 CDC42EP3Q9UKI2 254 aa12.55□□□□□ -0.4
NUP54-214ENST00000514307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.55□□□□□ -0.44e-8■■■■■ 30.4
NUP54-214ENST00000514307 TRBV7-1A0A0A6YYK4 115 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 TMEM89A2RUT3 159 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 YIF1AO95070 293 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 S100A7P31151 101 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 CDC34P49427 236 aaPredicted RBP12.54□□□□□ -0.4
NUP54-214ENST00000514307 PPT1P50897 306 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 PMS2P11Q13670 270 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 Q56UQ5 140 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 C19orf54Q5BKX5 351 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 LCN15Q6UWW0 184 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 IL17RELQ6ZVW7 336 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 Q8WTZ3 238 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 RAB24Q969Q5 203 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 EEF1AKMT3Q96AZ1 226 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 SMDT1Q9H4I9 107 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 TNCP24821 2201 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 CR1P17927 2039 aa12.54□□□□□ -0.4
NUP54-214ENST00000514307 TET2Q6N021 2002 aaPredicted RBP12.54□□□□□ -0.4
NUP54-214ENST00000514307 IGKV1D-37A0A075B6S9 117 aa12.53□□□□□ -0.4
NUP54-214ENST00000514307 A0A0G2JLM5 398 aa12.53□□□□□ -0.4
NUP54-214ENST00000514307 MAP1LC3B2A6NCE7 125 aa12.53□□□□□ -0.4
NUP54-214ENST00000514307 COX7A2P2O60397 106 aa12.53□□□□□ -0.4
NUP54-214ENST00000514307 LY6G6DO95868 133 aa12.53□□□□□ -0.4
NUP54-214ENST00000514307 IFNA1P01562 189 aa12.53□□□□□ -0.4
NUP54-214ENST00000514307 TAGLN2P37802 199 aaKnown RBP12.53□□□□□ -0.4
NUP54-214ENST00000514307 YPEL3P61236 119 aaPredicted RBP12.53□□□□□ -0.4
NUP54-214ENST00000514307 SLC35B1P78383 322 aa12.53□□□□□ -0.4
NUP54-214ENST00000514307 ZNF418Q8TF45 676 aaPredicted RBP12.53□□□□□ -0.4
NUP54-214ENST00000514307 MAP1LC3BQ9GZQ8 125 aa12.53□□□□□ -0.4
NUP54-214ENST00000514307 EIF5A2Q9GZV4 153 aaKnown RBP12.53□□□□□ -0.4
NUP54-214ENST00000514307 MRPL36Q9P0J6 103 aaKnown RBP12.53□□□□□ -0.4
NUP54-214ENST00000514307 F8P00451 2351 aa12.52□□□□□ -0.4
NUP54-214ENST00000514307 TEP1Q99973 2627 aaKnown RBP12.52□□□□□ -0.4
NUP54-214ENST00000514307 HYPMO75409 117 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 IGLC1P0CG04 106 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 SRD5A1P18405 259 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 PPIFP30405 207 aaKnown RBP12.52□□□□□ -0.41
NUP54-214ENST00000514307 TAS2R45P59539 299 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 ZNF90Q03938 601 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 C15orf32Q32M92 178 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 FAM209BQ5JX69 171 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 SPSB3Q6PJ21 355 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 MS4A10Q96PG2 267 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 JMJD8Q96S16 334 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 MRPL32Q9BYC8 188 aaKnown RBP12.52□□□□□ -0.41
NUP54-214ENST00000514307 TECRQ9NZ01 308 aaKnown RBP12.52□□□□□ -0.41
NUP54-214ENST00000514307 RNF24Q9Y225 148 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 AKAP9Q99996 3911 aa12.52□□□□□ -0.41
NUP54-214ENST00000514307 CELSR1Q9NYQ6 3014 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 CLDN34H7C241 214 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 NUPL2O15504 423 aaKnown RBP12.51□□□□□ -0.41
NUP54-214ENST00000514307 CXorf1O96002 111 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 TRGV3P03979 118 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 CRYBA1P05813 215 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 PSMB3P49720 205 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 PLP1P60201 277 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 ZNF726P1Q15940 193 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 GUK1Q16774 197 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 TIGITQ495A1 244 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 FAM78BQ5VT40 261 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 C10orf113Q5VZT2 155 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 FAM210AQ96ND0 272 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 TREM1Q9NP99 234 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 LINC00527Q9UJ94 153 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 FUT9Q9Y231 359 aa12.51□□□□□ -0.41
NUP54-214ENST00000514307 ANKRD34BA5PLL1 514 aa12.5□□□□□ -0.41
NUP54-214ENST00000514307 RBFOX3A6NFN3 312 aa12.5□□□□□ -0.41
NUP54-214ENST00000514307 KRBOX1C9JBD0 128 aa12.5□□□□□ -0.41
NUP54-214ENST00000514307 TOMM40O96008 361 aa12.5□□□□□ -0.41
NUP54-214ENST00000514307 OR5G3P0C626 314 aa12.5□□□□□ -0.41
NUP54-214ENST00000514307 PF4V1P10720 104 aa12.5□□□□□ -0.41
NUP54-214ENST00000514307 GATA2P23769 480 aaPredicted RBP12.5□□□□□ -0.41
NUP54-214ENST00000514307 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
NUP54-214ENST00000514307 OR51G1Q8NGK1 321 aa12.5□□□□□ -0.41
NUP54-214ENST00000514307 ZNF502Q8TBZ5 544 aa12.5□□□□□ -0.41
NUP54-214ENST00000514307 MAP1AP78559 2803 aaPredicted RBP12.5□□□□□ -0.41
NUP54-214ENST00000514307 A0A1B0GV50 99 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 IGKV1-17P01599 117 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 IGLV1-40P01703 118 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 CLEC3BP05452 202 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 PSG1P11464 419 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 ORM2P19652 201 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 CCL20P78556 96 aa12.49□□□□□ -0.41
NUP54-214ENST00000514307 GCSAMLQ5JQS6 135 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms