RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 MRPL28Q13084 256 aaKnown RBP4.83□□□□□ -1.64
CLDND1-229ENST00000513988 C12orf73Q69YU5 71 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 CDH26Q8IXH8 852 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 ACBD7Q8N6N7 88 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 ZFP41Q8N8Y5 198 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 NUDT10Q8NFP7 164 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 BAALCQ8WXS3 180 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 NUDT11Q96G61 164 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 MYCBPQ99417 103 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-229ENST00000513988 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 TRGV2A0A075B6R0 118 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 IGHV3-38A0A0C4DH36 116 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 A8MTW9 85 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 SNURFLB1AK76 121 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 EDF1O60869 148 aaKnown RBP4.82□□□□□ -1.64
CLDND1-229ENST00000513988 ZNF324O75467 553 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-229ENST00000513988 SLC22A5O76082 557 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 DIRAS3O95661 229 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 ST3GAL4Q11206 333 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 H1FOOQ8IZA3 346 aaPredicted RBP4.82□□□□□ -1.64
CLDND1-229ENST00000513988 ADGRG5Q8IZF4 528 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 SYS1Q8N2H4 156 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 MS4A15Q8N5U1 240 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 DMBX1Q8NFW5 382 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 OR11H7Q8NGC8 314 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 DNAJC9Q8WXX5 260 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 TMEM56Q96MV1 263 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 WDR12Q9GZL7 423 aaKnown RBP4.82□□□□□ -1.64
CLDND1-229ENST00000513988 RPRMQ9NS64 109 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 FGFR1OP2Q9NVK5 253 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 TAS2R8Q9NYW2 309 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 KIF25-AS1Q9Y6Z4 181 aa4.82□□□□□ -1.64
CLDND1-229ENST00000513988 TRAV26-2A0A0B4J265 109 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 J3QRE1 110 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 SCGB2A1O75556 95 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 SLPIP03973 132 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 ALPLP05186 524 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 UBBP0CG47 229 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 NQO2P16083 231 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 SRIP30626 198 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 TAS2R31P59538 309 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 LINC01556Q5JQF7 62 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 Q6ZTI0 123 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 LHFPL3Q86UP9 236 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 CCDC28AQ8IWP9 274 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 TAGLN3Q9UI15 199 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 OR51B2Q9Y5P1 312 aa4.81□□□□□ -1.64
CLDND1-229ENST00000513988 A0A0A6YYD4 124 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 RNF222A6NCQ9 220 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 ZAR1LA6NP61 321 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 GSTZ1O43708 216 aaPredicted RBP4.8□□□□□ -1.64
CLDND1-229ENST00000513988 PRAF2O60831 178 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 LALBAP00709 142 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 GTF2A1P52655 376 aaPredicted RBP4.8□□□□□ -1.64
CLDND1-229ENST00000513988 CLDN12P56749 244 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 POU2AF1Q16633 256 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 SPAG16Q8N0X2 631 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 THAP8Q8NA92 274 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 GPR146Q96CH1 333 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 SDF2L1Q9HCN8 221 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 PRO0255Q9UI72 69 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 ARL2BPQ9Y2Y0 163 aa4.8□□□□□ -1.64
CLDND1-229ENST00000513988 BOLA2-SMG1P6H3BVE0 249 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 ISLRO14498 428 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 BUB3O43684 328 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 DUSP14O95147 198 aaKnown RBP4.79□□□□□ -1.64
CLDND1-229ENST00000513988 IGLV2-14P01704 120 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 CNN1P51911 297 aaKnown RBP4.79□□□□□ -1.64
CLDND1-229ENST00000513988 SCAND1P57086 179 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 EIF4EBP1Q13541 118 aaPredicted RBP4.79□□□□□ -1.64
CLDND1-229ENST00000513988 GAMTQ14353 236 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 LAGE3Q14657 143 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 SPARTQ8N0X7 666 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 MAFIPQ8WZ33 124 aa4.79□□□□□ -1.64
CLDND1-229ENST00000513988 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 A0A1W2PPK0 400 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 TMEM235A6NFC5 223 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 SOCS3O14543 225 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 PHOX2AO14813 284 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 RBFOX2O43251 390 aaKnown RBP eCLIP4.78□□□□□ -1.64
CLDND1-229ENST00000513988 PITX3O75364 302 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 CLN5O75503 358 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 HPRT1P00492 218 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 IGHV3-30P01768 117 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 IGHV3-33P01772 117 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 CDK1P06493 297 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 FCGR3AP08637 254 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 IGHV3-30-3P0DP02 117 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 IGHV3-30-5P0DP03 117 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 RAP2AP10114 183 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 ZNF182P17025 639 aaPredicted RBP4.78□□□□□ -1.64
CLDND1-229ENST00000513988 CRYBA4P53673 196 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 ERVK-16P61578 105 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 SLAQ13239 276 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 TIGITQ495A1 244 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 SPINK6Q6UWN8 80 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 NKAIN3Q8N8D7 197 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 ATP6V0E2Q8NHE4 81 aa4.78□□□□□ -1.64
CLDND1-229ENST00000513988 C7orf33Q8WU49 177 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms