RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	APOH	P02749	345 aa	Predicted RBP	12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	AKR1C4	P17516	323 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	ATF4	P18848	351 aa	Predicted RBP	12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	NPPC	P23582	126 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	S100A5	P33763	92 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	ATP5I	P56385	69 aa	Predicted RBP	12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	PRSS54	Q6PEW0	395 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	LYG2	Q86SG7	212 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	LGI3	Q8N145	548 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	LILRB2	Q8N423	598 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	TOMM5	Q8N4H5	51 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	STPG3	Q8N7X2	389 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	OR1S2	Q8NGQ3	325 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	RNF183	Q96D59	192 aa		12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.4	□□□□□ -0.42
MATR3-222	ENST00000513678	IGHV3OR16-13	A0A075B7E8	117 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	IGHV3-74	A0A0B4J1X5	117 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	IGLC1	P0CG04	106 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	NPY1R	P25929	384 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	YPEL3	P61236	119 aa	Predicted RBP	12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	SMCO1	Q147U7	214 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	PYDC2	Q56P42	97 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	TMEM128	Q5BJH2	165 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	ETFRF1	Q6IPR1	90 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	LYZL2	Q7Z4W2	148 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	LRTM2	Q8N967	370 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	METTL26	Q96S19	204 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678		U3KQ87	197 aa		12.39	□□□□□ -0.43
MATR3-222	ENST00000513678	RPL35A	P18077	110 aa	Known RBP	12.38	□□□□□ -0.43
MATR3-222	ENST00000513678	APRG1	Q8IVJ8	170 aa		12.38	□□□□□ -0.43
MATR3-222	ENST00000513678	MS4A6A	Q9H2W1	248 aa		12.38	□□□□□ -0.43
MATR3-222	ENST00000513678	PRR13	Q9NZ81	148 aa		12.38	□□□□□ -0.43
MATR3-222	ENST00000513678		U3KQE9	123 aa		12.38	□□□□□ -0.43
MATR3-222	ENST00000513678	CCDC160	A6NGH7	325 aa		12.37	□□□□□ -0.43
MATR3-222	ENST00000513678	SLC25A6	P12236	298 aa		12.37	□□□□□ -0.43
MATR3-222	ENST00000513678	TFPI2	P48307	235 aa		12.37	□□□□□ -0.43
MATR3-222	ENST00000513678	RND2	P52198	227 aa		12.37	□□□□□ -0.43
MATR3-222	ENST00000513678	ZNF124	Q15973	351 aa		12.37	□□□□□ -0.43
MATR3-222	ENST00000513678	TIGIT	Q495A1	244 aa		12.37	□□□□□ -0.43
MATR3-222	ENST00000513678	DTD1	Q8TEA8	209 aa		12.37	□□□□□ -0.43
MATR3-222	ENST00000513678	LINC00476	Q8WZB0	136 aa		12.37	□□□□□ -0.43
MATR3-222	ENST00000513678	NUPR2	A6NF83	97 aa		12.36	□□□□□ -0.43
MATR3-222	ENST00000513678	PITX3	O75364	302 aa		12.36	□□□□□ -0.43
MATR3-222	ENST00000513678	OR10J1	P30954	320 aa		12.36	□□□□□ -0.43
MATR3-222	ENST00000513678	GBGT1	Q8N5D6	347 aa		12.36	□□□□□ -0.43
MATR3-222	ENST00000513678		Q8WTZ3	238 aa		12.36	□□□□□ -0.43
MATR3-222	ENST00000513678	GRAMD2B	Q96HH9	432 aa		12.36	□□□□□ -0.43
MATR3-222	ENST00000513678	NARS2	Q96I59	477 aa	Known RBP	12.36	□□□□□ -0.43
MATR3-222	ENST00000513678	CSTL1	Q9H114	145 aa		12.36	□□□□□ -0.43
MATR3-222	ENST00000513678	IGKV3-7	A0A075B6H7	116 aa		12.35	□□□□□ -0.43
MATR3-222	ENST00000513678	CXorf65	A6NEN9	183 aa		12.35	□□□□□ -0.43
MATR3-222	ENST00000513678	DNASE2	O00115	360 aa	Predicted RBP	12.35	□□□□□ -0.43
MATR3-222	ENST00000513678	P2RY1	P47900	373 aa		12.35	□□□□□ -0.43
MATR3-222	ENST00000513678	PMS2P11	Q13670	270 aa		12.35	□□□□□ -0.43
MATR3-222	ENST00000513678	SPANXN2	Q5MJ10	180 aa		12.35	□□□□□ -0.43
MATR3-222	ENST00000513678	GATAD1	Q8WUU5	269 aa		12.35	□□□□□ -0.43
MATR3-222	ENST00000513678	RBKS	Q9H477	322 aa		12.35	□□□□□ -0.43
MATR3-222	ENST00000513678	IGHV3-66	A0A0C4DH42	116 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	MPTX1	A8MV57	137 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	FAM90A26	D6RGX4	464 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678		K7EQG2	157 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	NXPH3	O95157	252 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	IFNA10	P01566	189 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	GPX4	P36969	197 aa	Predicted RBP	12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	UBE2M	P61081	183 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	TMED4	Q7Z7H5	227 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	NPIPB3	Q92617	1050 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	SRR	Q9GZT4	340 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	TMED3	Q9Y3Q3	217 aa		12.34	□□□□□ -0.43
MATR3-222	ENST00000513678	HELT	A6NFD8	242 aa		12.33	□□□□□ -0.44
MATR3-222	ENST00000513678	TOMM40	O96008	361 aa		12.33	□□□□□ -0.44
MATR3-222	ENST00000513678	HNRNPC	P07910	306 aa	Known RBP eCLIP	12.33	□□□□□ -0.44	6e-7	■■■□□ 18.6
MATR3-222	ENST00000513678	EIF2B2	P49770	351 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-222	ENST00000513678	RPL11	P62913	178 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-222	ENST00000513678	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-222	ENST00000513678	OR1S1	Q8NH92	325 aa		12.33	□□□□□ -0.44
MATR3-222	ENST00000513678	DCANP1	Q8TF63	244 aa		12.33	□□□□□ -0.44
MATR3-222	ENST00000513678	KMT2A	Q03164	3969 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	SFT2D2	O95562	160 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	RD3L	P0DJH9	198 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	VAMP1	P23763	118 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	AP2S1	P53680	142 aa	Predicted RBP	12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	DEFB131A	P59861	70 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	RBMS2	Q15434	407 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	C16orf54	Q6UWD8	224 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	CENPS	Q8N2Z9	138 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	FAM24B	Q8N5W8	94 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	TMEM217	Q8N7C4	229 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	GLMP	Q8WWB7	406 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	ACY3	Q96HD9	319 aa		12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	SEPSECS	Q9HD40	501 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-222	ENST00000513678	NAP1L6	A6NFF2	107 aa		12.31	□□□□□ -0.44
MATR3-222	ENST00000513678	IL4	P05112	153 aa		12.31	□□□□□ -0.44
MATR3-222	ENST00000513678	PPP1R1A	Q13522	171 aa		12.31	□□□□□ -0.44
MATR3-222	ENST00000513678	USF2	Q15853	346 aa	Predicted RBP	12.31	□□□□□ -0.44
MATR3-222	ENST00000513678	C11orf68	Q9H3H3	251 aa	Known RBP	12.31	□□□□□ -0.44
MATR3-222	ENST00000513678	RABAC1	Q9UI14	185 aa		12.31	□□□□□ -0.44
MATR3-222	ENST00000513678	VPS13D	Q5THJ4	4388 aa		12.3	□□□□□ -0.44
MATR3-222	ENST00000513678	MED6	O75586	246 aa		12.3	□□□□□ -0.44
MATR3-222	ENST00000513678	IFNA4	P05014	189 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms