RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 SNURFLB1AK76 121 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 K7EQG2 157 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 DNASE2O00115 360 aaPredicted RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 CREBL2O60519 120 aaPredicted RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 DHFRP00374 187 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 FCGR3AP08637 254 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 ZNF705DP0CH99 300 aaPredicted RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 ZNF705BP0CI00 300 aaPredicted RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 OR13C7P0DN81 318 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 CD37P11049 281 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 LINC00315P59091 139 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 TIMM50Q3ZCQ8 353 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 CCDC58Q4VC31 144 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 FFAR4Q5NUL3 377 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 C1orf100Q5SVJ3 147 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 GDF5OSQ5U4N7 250 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 LIPKQ5VXJ0 399 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 ZNF773Q6PK81 442 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 TOMM20LQ6UXN7 152 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 CBR4Q8N4T8 237 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 LRTM2Q8N967 370 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 GDPD1Q8N9F7 314 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 STXBP6Q8NFX7 210 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 OR5AP2Q8NGF4 316 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 OR4A4PQ8NGN8 299 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 OR10J5Q8NHC4 309 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 DCANP1Q8TF63 244 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 TRUB1Q8WWH5 349 aaKnown RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 DGCR14Q96DF8 476 aaKnown RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 MRPL48Q96GC5 212 aaKnown RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 ADTRPQ96IZ2 230 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 UQCC2Q9BRT2 126 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 NIPSNAP3BQ9BS92 247 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 RNF167Q9H6Y7 350 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 TAS2R8Q9NYW2 309 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 ELF5Q9UKW6 265 aaPredicted RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 SPATA2Q9UM82 520 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 RBMX2Q9Y388 322 aaKnown RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 YTHDF2Q9Y5A9 579 aaKnown RBP3.28□□□□□ -1.88
HTT-211ENST00000513326 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
HTT-211ENST00000513326 FAT3Q8TDW7 4589 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 TRAV14DV4A0A0A6YYC5 116 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 A0A1B0GU03 582 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 EI24O14681 340 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 TNFSF12O43508 249 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 WBP4O75554 376 aaKnown RBP3.27□□□□□ -1.89
HTT-211ENST00000513326 IGKV3-20P01619 116 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 NFYAP23511 347 aaPredicted RBP3.27□□□□□ -1.89
HTT-211ENST00000513326 SERPINB10P48595 397 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 CMC4P56277 68 aaPredicted RBP3.27□□□□□ -1.89
HTT-211ENST00000513326 CLDN12P56749 244 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 TPBGQ13641 420 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 YIF1BQ5BJH7 314 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 PSMG4Q5JS54 123 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 MEDAGQ5VYS4 303 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 SLC25A24Q6NUK1 477 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 SSX7Q7RTT5 188 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 CDH26Q8IXH8 852 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 RHOXF1Q8NHV9 184 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 TCTEX1D2Q8WW35 142 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 PRAC1Q96KF2 57 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 RAB40CQ96S21 281 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 GINS4Q9BRT9 223 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 ALKBH7Q9BT30 221 aaPredicted RBP3.27□□□□□ -1.89
HTT-211ENST00000513326 HRASLSQ9HDD0 168 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 FGF20Q9NP95 211 aaPredicted RBP3.27□□□□□ -1.89
HTT-211ENST00000513326 BABAM2Q9NXR7 383 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 ZNF586Q9NXT0 402 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 ARL2BPQ9Y2Y0 163 aa3.27□□□□□ -1.89
HTT-211ENST00000513326 RBM7Q9Y580 266 aaKnown RBP3.27□□□□□ -1.89
HTT-211ENST00000513326 A0A075B6Q4 140 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 A0A087WYN8 130 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 TRAV2A0A0B4J234 112 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 TEX50A0A1B0GTY4 177 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 H3BMM0 161 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 I3L2K1 104 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 UPK2O00526 184 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 DCTN3O75935 186 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 SERPINE2P07093 398 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 UBBP0CG47 229 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 PTHLHP12272 177 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 CALB2P22676 271 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 TAS2R43P59537 309 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 SRSF9Q13242 221 aaKnown RBP eCLIP3.26□□□□□ -1.89
HTT-211ENST00000513326 FCN2Q15485 313 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 TMEM41BQ5BJD5 291 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 TMEM69Q5SWH9 247 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 C1orf158Q8N1D5 194 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 ZNF709Q8N972 641 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 C15orf53Q8NAA6 179 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 OR4S2Q8NH73 311 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 SLC25A46Q96AG3 418 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 NXF2Q9GZY0 626 aaKnown RBP3.26□□□□□ -1.89
HTT-211ENST00000513326 Q9H3A6 140 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 SMPD3Q9NY59 655 aaPredicted RBP3.26□□□□□ -1.89
HTT-211ENST00000513326 BET1LQ9NYM9 111 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 MRPL36Q9P0J6 103 aaKnown RBP3.26□□□□□ -1.89
HTT-211ENST00000513326 GHRLQ9UBU3 117 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 MGAT4AQ9UM21 535 aa3.26□□□□□ -1.89
HTT-211ENST00000513326 MRPS7Q9Y2R9 242 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms