RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 Q56UQ5 140 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 KHDC1LQ5JSQ8 128 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 CLEC19AQ6UXS0 136 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 C18orf65Q6ZTR6 163 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 TMUB2Q71RG4 321 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 THAP8Q8NA92 274 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 UBAC2Q8NBM4 344 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 C4orf3Q8WVX3 66 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 ARL6Q9H0F7 186 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 WDR83OSQ9Y284 106 aa9.68□□□□□ -0.86
PDPN-210ENST00000513143 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
PDPN-210ENST00000513143 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 OR2T8A6NH00 312 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 HNRNPCP07910 306 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDPN-210ENST00000513143 CTSGP08311 255 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 IGLC1P0CG04 106 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 GPR183P32249 361 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 HIST2H2BDQ6DRA6 164 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 TEPPQ6URK8 271 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 KLHL30-AS1Q8NEE0 82 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 OR5B12Q96R08 314 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 CITED1Q99966 193 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 ARPC5LQ9BPX5 153 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 PARD6GQ9BYG4 376 aaPredicted RBP9.67□□□□□ -0.86
PDPN-210ENST00000513143 CYTL1Q9NRR1 136 aa9.67□□□□□ -0.86
PDPN-210ENST00000513143 PEF1Q9UBV8 284 aaKnown RBP9.67□□□□□ -0.86
PDPN-210ENST00000513143 TENM1Q9UKZ4 2725 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 IGKV1D-37A0A075B6S9 117 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 UBE2L5PA0A1B0GUS4 154 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 KANTRA0A1W2PQU2 76 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 ANKRD34BA5PLL1 514 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 TGOLN2O43493 480 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 BCL2L11O43521 198 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 IGKV1-17P01599 117 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 TRBV12-3P01733 135 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 OR10J1P30954 320 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 ADMP35318 185 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 RIPPLY3P57055 190 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 ZNF266Q14584 549 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 SPSB3Q6PJ21 355 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 NDUFA11Q86Y39 141 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 TRGV9Q99603 122 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 CHRDL1Q9BU40 450 aa9.66□□□□□ -0.86
PDPN-210ENST00000513143 WDR61Q9GZS3 305 aaKnown RBP9.66□□□□□ -0.86
PDPN-210ENST00000513143 ZFP92A6NM28 416 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 PPP5D1E7EU14 171 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 BMPR1BO00238 502 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 NUPL2O15504 423 aaKnown RBP9.65□□□□□ -0.86
PDPN-210ENST00000513143 MPDU1O75352 247 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 SCGB2A1O75556 95 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 JTBO76095 146 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 IFNA5P01569 189 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 HSPB1P04792 205 aaKnown RBP9.65□□□□□ -0.86
PDPN-210ENST00000513143 FGF7P21781 194 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 ARL3P36405 182 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 RPL7L1Q6DKI1 246 aaKnown RBP9.65□□□□□ -0.86
PDPN-210ENST00000513143 BTNL8Q6UX41 500 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 MGST2Q99735 147 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 ZNF747Q9BV97 191 aa9.65□□□□□ -0.86
PDPN-210ENST00000513143 IGHV4OR15-8A0A075B7B6 117 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 A0A087WW49 117 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 BORCS7-ASMTA0A0B4J1R7 106 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 A0A1W2PRX2 142 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 NUDT19A8MXV4 375 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 AGPAT2O15120 278 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 GGCTO75223 188 aaKnown RBP9.64□□□□□ -0.87
PDPN-210ENST00000513143 C4BPBP20851 252 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 YPEL3P61236 119 aaPredicted RBP9.64□□□□□ -0.87
PDPN-210ENST00000513143 ZNF90Q03938 601 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 RAB31Q13636 194 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 OPCMLQ14982 345 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 TIGITQ495A1 244 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 C8orf86Q6ZUL3 223 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 SCGB1C1Q8TD33 95 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 ZNF414Q96IQ9 312 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 COL6A5A8TX70 2615 aa9.64□□□□□ -0.87
PDPN-210ENST00000513143 FABP1P07148 127 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 C12orf54Q6X4T0 127 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 CYP2G1PQ6ZSU1 146 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 OR1N2Q8NGR9 330 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 GGTLC1Q9BX51 225 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 NPCDR1Q9BY65 106 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 ARV1Q9H2C2 271 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
PDPN-210ENST00000513143 LINC01619G3V211 115 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 CCL24O00175 119 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 OR2C1O95371 312 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 TOMM40O96008 361 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 RD3LP0DJH9 198 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 PSG1P11464 419 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 RPL29P47914 159 aaKnown RBP9.62□□□□□ -0.87
PDPN-210ENST00000513143 CAMLGP49069 296 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 SELENOTP62341 195 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 RELQ04864 619 aaPredicted RBP9.62□□□□□ -0.87
PDPN-210ENST00000513143 ZNF616Q08AN1 781 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 FHL3Q13643 280 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 DEFB136Q30KP8 78 aa9.62□□□□□ -0.87
PDPN-210ENST00000513143 NSUN5P1Q3KNT7 163 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms