RNA–Protein interactions for RNA: ENST00000512385.5

SNCAIP-217, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-217ENST00000512385 IGKV1OR2-108A0A075B7D4 117 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 TRAV9-2A0A087WT02 112 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 OOEPA6NGQ2 149 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 CORTO00230 105 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 NUDT3O95989 172 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 FOXA3P55318 350 aaPredicted RBP11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 TEPPQ6URK8 271 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 ZCCHC24Q8N2G6 241 aaKnown RBP11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 PRR7Q8TB68 274 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 OR8B2Q96RD0 313 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 PMCHL2Q9BQD1 86 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 NAV3Q8IVL0 2385 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 LRRK2Q5S007 2527 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 TRBV9A0A0B4J1U6 114 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 GPR12P47775 334 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 WDR73Q6P4I2 378 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 MUC15Q8N387 334 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 RND1Q92730 232 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 TMEM140Q9NV12 185 aa11.28□□□□□ -0.6
SNCAIP-217ENST00000512385 IGHV1-69-2A0A0G2JMI3 117 aa11.27□□□□□ -0.6
SNCAIP-217ENST00000512385 C2orf70A6NJV1 201 aa11.27□□□□□ -0.6
SNCAIP-217ENST00000512385 MPDU1O75352 247 aa11.27□□□□□ -0.6
SNCAIP-217ENST00000512385 LINC00869P0C866 280 aa11.27□□□□□ -0.6
SNCAIP-217ENST00000512385 AMMECR1LQ6DCA0 310 aa11.27□□□□□ -0.6
SNCAIP-217ENST00000512385 TXNDC17Q9BRA2 123 aa11.27□□□□□ -0.6
SNCAIP-217ENST00000512385 POLDIP2Q9Y2S7 368 aa11.27□□□□□ -0.6
SNCAIP-217ENST00000512385 MUC21A0A0G2JKD1 596 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 MUC21A0A140T8X8 626 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 VWC2LB2RUY7 222 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 H0YJW9 148 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 SNAI2O43623 268 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 MT-ND6P03923 174 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 MORN2Q502X0 79 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 MUC21Q5SSG8 566 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 TRAT1Q6PIZ9 186 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 LINC01560Q8TB33 94 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 ZNF596Q8TC21 504 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 CST9LQ9H4G1 147 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 ZNF331Q9NQX6 463 aaPredicted RBP11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 TNFRSF19Q9NS68 423 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 GNG12Q9UBI6 72 aa11.27□□□□□ -0.61
SNCAIP-217ENST00000512385 TAX1BP3O14907 124 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 IGLV1-44P01699 117 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 NPY1RP25929 384 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 SLC35E4Q6ICL7 350 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 OR4A47Q6IF82 309 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 C11orf53Q8IXP5 236 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 URB1-AS1Q96HZ7 61 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 NABP2Q9BQ15 211 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 IL19Q9UHD0 177 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 ARL2-SNX15V9GYD0 113 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 MED13LQ71F56 2210 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 SMIM27A0A1W2PRY6 76 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 MMP23AO75900 390 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 IGHV3-48P01763 117 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 THBDP07204 575 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 AREGP15514 252 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 UBE2G1P62253 170 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 TIMM23BQ5SRD1 257 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 C19orf35Q6ZS72 473 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 PLEKHA3Q9HB20 300 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 CELSR2Q9HCU4 2923 aa11.26□□□□□ -0.61
SNCAIP-217ENST00000512385 ZNF138P52744 262 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 C1orf162Q8NEQ5 155 aaPredicted RBP11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 OSTCQ9NRP0 149 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 C16orf97H3BN30 126 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 RBPJQ06330 500 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 OCIAD2Q56VL3 154 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 NUP35Q8NFH5 326 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 OR8B3Q8NGG8 313 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 OR9G1Q8NH87 305 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 CHODLQ9H9P2 273 aa11.25□□□□□ -0.61
SNCAIP-217ENST00000512385 OR4C46A6NHA9 309 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 TIMM8AO60220 97 aaPredicted RBP11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 ADORA2A-AS1P86434 159 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 PRR20EP86478 221 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 PRR20CP86479 221 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 PRR20DP86480 221 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 PRR20BP86481 221 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 PRR20AP86496 221 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 Q8IYB0 196 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 OR2D3Q8NGH3 330 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 CELSR1Q9NYQ6 3014 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 ISLRO14498 428 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 MT-CO2P00403 227 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 PYYP10082 97 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 TCTAP57738 103 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 IGF2BP2-AS1Q96M15 143 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 VKORC1Q9BQB6 163 aa11.24□□□□□ -0.61
SNCAIP-217ENST00000512385 A0A087X0K7 114 aa11.23□□□□□ -0.61
SNCAIP-217ENST00000512385 IZUMO1RA6ND01 250 aa11.23□□□□□ -0.61
SNCAIP-217ENST00000512385 SAP30O75446 220 aa11.23□□□□□ -0.61
SNCAIP-217ENST00000512385 RIPPLY3P57055 190 aa11.23□□□□□ -0.61
SNCAIP-217ENST00000512385 BSPH1Q075Z2 132 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms