RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	PPBP	P02775	128 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	PRH1	P02810	166 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	TCRB	P04435	133 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	FOLR2	P14207	255 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	IGLL1	P15814	213 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	C4BPB	P20851	252 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	RAB2A	P61019	212 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	RAB5B	P61020	215 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	RAB11A	P62491	216 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	BLOC1S1	P78537	153 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	WT1-AS	Q06250	92 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	PPP1R1A	Q13522	171 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	KLK9	Q2XQG4	91 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340		Q56UQ5	140 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	HIST2H2BD	Q6DRA6	164 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	C18orf65	Q6ZTR6	163 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	LYG2	Q86SG7	212 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	MRPL52	Q86TS9	123 aa	Known RBP	5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	ZNF114	Q8NC26	417 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	DUSP18	Q8NEJ0	188 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	OR10W1	Q8NGF6	305 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	DCUN1D4	Q92564	292 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	TMEM230	Q96A57	120 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	GPR146	Q96CH1	333 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	LINC00052	Q96N35	136 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	CLUHP3	Q96NS8	147 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	DUX3	Q96PT4	197 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	SDHC	Q99643	169 aa	Predicted RBP	5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	C20orf85	Q9H1P6	137 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	C21orf62	Q9NYP8	219 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	KLK9	Q9UKQ9	250 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	UFC1	Q9Y3C8	167 aa		5.77	□□□□□ -1.49
NR1I3-231	ENST00000512340	VWF	P04275	2813 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	TRAV30	A0A087WSZ9	112 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	ZNF320	A2RRD8	509 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	C5orf52	A6NGY3	159 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340		E7EUB6	86 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	TSTD3	H0UI37	97 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	GNG7	O60262	68 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	NDUFB8	O95169	186 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	CLEC3B	P05452	202 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	HOXB5	P09067	269 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340		P0C879	139 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	SLC25A4	P12235	298 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	MYOD1	P15172	320 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	SPN	P16150	400 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	OPRK1	P41145	380 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	PKIA	P61925	76 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	SUPT4H1	P63272	117 aa	Known RBP	5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	DHRS2	Q13268	280 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	KLF5	Q13887	457 aa	Predicted RBP	5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	USF2	Q15853	346 aa	Predicted RBP	5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	SAMD5	Q5TGI4	173 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	LAMTOR1	Q6IAA8	161 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	ACSM6	Q6P461	480 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	CLEC19A	Q6UXS0	136 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	LYZL2	Q7Z4W2	148 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	GPHB5	Q86YW7	130 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	UBAC2	Q8NBM4	344 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	OR9G4	Q8NGQ1	327 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	RNASEH2C	Q8TDP1	164 aa	Known RBP	5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	DYNLRB2	Q8TF09	96 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	PINX1	Q96BK5	328 aa	Known RBP	5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	FANCD2OS	Q96PS1	177 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	HSPB11	Q9Y547	144 aa		5.76	□□□□□ -1.49
NR1I3-231	ENST00000512340	PGPEP1L	A6NFU8	196 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	CBY3	A6NI87	242 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	CGB1	A6NKQ9	187 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340		G3V4G9	280 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	LGALS9	O00182	355 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	PLA2G10	O15496	165 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	PRAF2	O60831	178 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	METTL15P1	P0C7V9	234 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	NPY1R	P25929	384 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	DDT	P30046	118 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	S100A7	P31151	101 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	GPR183	P32249	361 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	CAMLG	P49069	296 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	SLURP1	P55000	103 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	SYNJ2BP	P57105	145 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	IZUMO4	Q1ZYL8	232 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	OXLD1	Q5BKU9	147 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	NMS	Q5H8A3	153 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	KPRP	Q5T749	579 aa	Predicted RBP	5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	GGNBP1	Q5YKI7	109 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	LCN12	Q6JVE5	192 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	UXS1	Q8NBZ7	420 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	OR2K2	Q8NGT1	345 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	ZNF502	Q8TBZ5	544 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	MITD1	Q8WV92	249 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	DLX4	Q92988	240 aa	Predicted RBP	5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	GINS3	Q9BRX5	216 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	TECR	Q9NZ01	308 aa	Known RBP	5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340	HSPB7	Q9UBY9	170 aa		5.75	□□□□□ -1.49
NR1I3-231	ENST00000512340		A0A1B0GW64	132 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	OR2T8	A6NH00	312 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	BMPR1B	O00238	502 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	NDUFA4	O00483	81 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	TGOLN2	O43493	480 aa		5.74	□□□□□ -1.49
NR1I3-231	ENST00000512340	SYNGR2	O43760	224 aa		5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms