RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 UBE2L5PA0A1B0GUS4 154 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 HBE1P02100 147 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 OR13C7P0DN81 318 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 MYOD1P15172 320 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 RAB31Q13636 194 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 C10orf55Q5SWW7 151 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 AKR1C8PQ5T2L2 129 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 TEPPQ6URK8 271 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 COMMD7Q86VX2 200 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 SLC7A5P1Q8MH63 180 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 TTC9CQ8N5M4 171 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 THAP8Q8NA92 274 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 TMEM116Q8NCL8 245 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 OR10W1Q8NGF6 305 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 CXorf58Q96LI9 332 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 SERTAD4Q9NUC0 356 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 PITPNC1Q9UKF7 332 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 MOB4Q9Y3A3 225 aa8.18□□□□□ -1.1
PDLIM5-217ENST00000512274 DNAH3Q8TD57 4116 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 IGHV7-81A0A0B4J1V7 117 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 RBMY1BA6NDE4 496 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 RBMY1EA6NEQ0 496 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 SEC14L6B5MCN3 397 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 TEX46H3BTG2 121 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 FCN1O00602 326 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 CYB5BO43169 146 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 RBMY1DP0C7P1 496 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 FGF7P21781 194 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 FCGR2BP31994 310 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 CAMLGP49069 296 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 CX3CL1P78423 397 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 PRR20EP86478 221 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 PRR20CP86479 221 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 PRR20DP86480 221 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 PRR20BP86481 221 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 PRR20AP86496 221 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 RUNX1Q01196 453 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 HES1Q14469 280 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 FXYD3Q14802 87 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 PLGLAQ15195 96 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 TMEM41BQ5BJD5 291 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 Q6ZRG5 221 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 SLC16A13Q7RTY0 426 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 ZNF709Q8N972 641 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 ARPC1AQ92747 370 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 DPF1Q92782 380 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 ATP6V0BQ99437 205 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 GGTLC1Q9BX51 225 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 HINT2Q9BX68 163 aa8.17□□□□□ -1.1
PDLIM5-217ENST00000512274 A6NDX4 124 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 KRBOX1C9JBD0 128 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 M6PRP20645 277 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 CD24P25063 80 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 TAGLN2P37802 199 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 SELENOTP62341 195 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 GAMTQ14353 236 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 TMEM182Q6ZP80 229 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 C5orf56Q8N8D9 126 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 SLC35E1Q96K37 410 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 RSG1Q9BU20 258 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 NPFFR1Q9GZQ6 430 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 ZNF702PQ9H963 129 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 RPRMQ9NS64 109 aa8.16□□□□□ -1.1
PDLIM5-217ENST00000512274 CNIH1O95406 144 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 PRH1P02810 166 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 CD5P06127 495 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 AREGP15514 252 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 HIST1H1BP16401 226 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 RAB2AP61019 212 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 ACOT6Q3I5F7 207 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 AKIRIN2Q53H80 203 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 SPSB3Q6PJ21 355 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 TRGV9Q99603 122 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 MGST2Q99735 147 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 RASL11BQ9BPW5 248 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 FNDC4Q9H6D8 234 aaPredicted RBP8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 SLC45A2Q9UMX9 530 aa8.15□□□□□ -1.1
PDLIM5-217ENST00000512274 IGLV11-55A0A075B6I3 123 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 CTXND1A0A1B0GTU2 59 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 I3L2K1 104 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 AGPAT2O15120 278 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 IGF1P05019 195 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 H2AFB1P0C5Y9 115 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 EGR2P11161 476 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 MFAP2P55001 183 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 NDPQ00604 133 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 AKR1C1Q04828 323 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 HNF4GQ14541 408 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 C19orf54Q5BKX5 351 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 ASPHD1Q5U4P2 390 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 ACSM6Q6P461 480 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 TMEM219Q86XT9 240 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 RPP25LQ8N5L8 163 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 OR4X1Q8NH49 305 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 FAM210AQ96ND0 272 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 RNF2Q99496 336 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 SLC25A33Q9BSK2 321 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 SCRT1Q9BWW7 348 aa8.14□□□□□ -1.11
PDLIM5-217ENST00000512274 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-217ENST00000512274 IGKV1OR2-108A0A075B7D4 117 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms