RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 GGTLC1Q9BX51 225 aa12.25□□□□□ -0.45
DDX41-213ENST00000512027 LOC102724200A0A096LPH7 203 aaPredicted RBP12.24□□□□□ -0.45
DDX41-213ENST00000512027 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 PITX3O75364 302 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 DFFBO76075 338 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 NDUFB6O95139 128 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 ZFAND6Q6FIF0 208 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 WFDC3Q8IUB2 231 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 NPIPB3Q92617 1050 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 VSIRQ9H7M9 311 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 TENM2Q9NT68 2774 aa12.24□□□□□ -0.45
DDX41-213ENST00000512027 NAP1L6A6NFF2 107 aa12.23□□□□□ -0.45
DDX41-213ENST00000512027 C3orf84H3BNL1 204 aa12.23□□□□□ -0.45
DDX41-213ENST00000512027 ADAP1O75689 374 aa12.23□□□□□ -0.45
DDX41-213ENST00000512027 OR10J1P30954 320 aa12.23□□□□□ -0.45
DDX41-213ENST00000512027 CASC10Q5T4H9 136 aa12.23□□□□□ -0.45
DDX41-213ENST00000512027 MAGT1Q9H0U3 335 aa12.23□□□□□ -0.45
DDX41-213ENST00000512027 NDUFA13Q9P0J0 144 aa12.23□□□□□ -0.45
DDX41-213ENST00000512027 C9orf170A2RU37 121 aa12.22□□□□□ -0.45
DDX41-213ENST00000512027 SLC25A4P12235 298 aa12.22□□□□□ -0.45
DDX41-213ENST00000512027 RPL35AP18077 110 aaKnown RBP12.22□□□□□ -0.45
DDX41-213ENST00000512027 ANXA7P20073 488 aaKnown RBP12.22□□□□□ -0.45
DDX41-213ENST00000512027 GGNBP1Q5YKI7 109 aa12.22□□□□□ -0.45
DDX41-213ENST00000512027 FAM24BQ8N5W8 94 aa12.22□□□□□ -0.45
DDX41-213ENST00000512027 OR1S2Q8NGQ3 325 aa12.22□□□□□ -0.45
DDX41-213ENST00000512027 U3KQ87 197 aa12.22□□□□□ -0.45
DDX41-213ENST00000512027 TRAV30A0A087WSZ9 112 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 MPTX1A8MV57 137 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 IFNA4P05014 189 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 LYL1P12980 280 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 NPPCP23582 126 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 RPL11P62913 178 aaKnown RBP12.21□□□□□ -0.45
DDX41-213ENST00000512027 METTL26Q96S19 204 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 MS4A6AQ9H2W1 248 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 MAP6D1Q9H9H5 199 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 CACFD1Q9UGQ2 172 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 PAIP2BQ9ULR5 123 aaKnown RBP12.21□□□□□ -0.45
DDX41-213ENST00000512027 TMED3Q9Y3Q3 217 aa12.21□□□□□ -0.45
DDX41-213ENST00000512027 PLA2G10O15496 165 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 SCGB2A1O75556 95 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 IL4P05112 153 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 OR4E1P0C645 316 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 CRYBB3P26998 211 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 UBE2MP61081 183 aaKnown RBP12.2□□□□□ -0.46
DDX41-213ENST00000512027 DHRS2Q13268 280 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 USF2Q15853 346 aaPredicted RBP12.2□□□□□ -0.46
DDX41-213ENST00000512027 ETFRF1Q6IPR1 90 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 NOXA1Q86UR1 476 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 OVOL2Q9BRP0 275 aa12.2□□□□□ -0.46
DDX41-213ENST00000512027 WRBO00258 174 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 BMI1P35226 326 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 P2RY1P47900 373 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 YPEL3P61236 119 aaPredicted RBP12.19□□□□□ -0.46
DDX41-213ENST00000512027 DEFB135Q30KP9 77 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 LYG2Q86SG7 212 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 STXBP6Q8NFX7 210 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 Q8WTZ3 238 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 LYSTQ99698 3801 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 RABAC1Q9UI14 185 aa12.19□□□□□ -0.46
DDX41-213ENST00000512027 PIGBOS1A0A0B4J2F0 54 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 CENPXA8MT69 81 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 FAM90A26D6RGX4 464 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 H3BP45 60 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
DDX41-213ENST00000512027 SLC25A6P12236 298 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 GAMTQ14353 236 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 C4orf46Q504U0 113 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 LEMD1Q68G75 181 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 C7orf50Q9BRJ6 194 aaKnown RBP12.18□□□□□ -0.46
DDX41-213ENST00000512027 TMEM231Q9H6L2 316 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 RYR2Q92736 4967 aa12.18□□□□□ -0.46
DDX41-213ENST00000512027 SACSQ9NZJ4 4579 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 IGKV1D-37A0A075B6S9 117 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 A0A1W2PS18 150 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 SYNGR2O43760 224 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 TOMM40O96008 361 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 HNRNPCP07910 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
DDX41-213ENST00000512027 PSG1P11464 419 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 DEFB131AP59861 70 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 PAFAH1B2P68402 229 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 ZNF90Q03938 601 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 OR51G1Q8NGK1 321 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 U3KQE9 123 aa12.17□□□□□ -0.46
DDX41-213ENST00000512027 AGRNO00468 2067 aa12.16□□□□□ -0.46
DDX41-213ENST00000512027 ZFP92A6NM28 416 aa12.16□□□□□ -0.46
DDX41-213ENST00000512027 LYRM1O43325 122 aa12.16□□□□□ -0.46
DDX41-213ENST00000512027 MED6O75586 246 aa12.16□□□□□ -0.46
DDX41-213ENST00000512027 RD3LP0DJH9 198 aa12.16□□□□□ -0.46
DDX41-213ENST00000512027 APOC4P55056 127 aa12.16□□□□□ -0.46
DDX41-213ENST00000512027 COQ8AQ8NI60 647 aa12.16□□□□□ -0.46
DDX41-213ENST00000512027 C20orf85Q9H1P6 137 aa12.16□□□□□ -0.46
DDX41-213ENST00000512027 CD5P06127 495 aa12.15□□□□□ -0.46
DDX41-213ENST00000512027 GPX4P36969 197 aaPredicted RBP12.15□□□□□ -0.46
DDX41-213ENST00000512027 POLR2GP62487 172 aaKnown RBP eCLIP12.15□□□□□ -0.46
DDX41-213ENST00000512027 RAB11AP62491 216 aa12.15□□□□□ -0.46
DDX41-213ENST00000512027 OR2F1Q13607 317 aa12.15□□□□□ -0.46
DDX41-213ENST00000512027 CNPY1Q3B7I2 92 aa12.15□□□□□ -0.46
DDX41-213ENST00000512027 SPANXN5Q5MJ07 72 aa12.15□□□□□ -0.46
DDX41-213ENST00000512027 C16orf54Q6UWD8 224 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms