RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 EWSR1Q01844 656 aaKnown RBP eCLIP15.04■□□□□ -0
SMAD1-211ENST00000512019 FHL3Q13643 280 aa15.04■□□□□ -0
SMAD1-211ENST00000512019 AKAP14Q86UN6 197 aa15.04■□□□□ -0
SMAD1-211ENST00000512019 MRAPQ8TCY5 172 aa15.04■□□□□ -0
SMAD1-211ENST00000512019 GGACTQ9BVM4 153 aa15.04■□□□□ -0
SMAD1-211ENST00000512019 NOTCH3Q9UM47 2321 aa15.04■□□□□ -0
SMAD1-211ENST00000512019 TRAV30A0A087WSZ9 112 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 FNDC10F2Z333 226 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 S100A11P31949 105 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 NUP62P37198 522 aaPredicted RBP15.03■□□□□ -0
SMAD1-211ENST00000512019 SLC38A11Q08AI6 406 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 GAMTQ14353 236 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 RPEL1Q2QD12 228 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 Q5BKY6 102 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 HAPLN4Q86UW8 402 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 LILRB2Q8N423 598 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 TMEM217Q8N7C4 229 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 DUX3Q96PT4 197 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 ZC4H2Q9NQZ6 224 aa15.03■□□□□ -0
SMAD1-211ENST00000512019 MRPL36Q9P0J6 103 aaKnown RBP15.03■□□□□ -0
SMAD1-211ENST00000512019 FXYD6-FXYD2A0A087WZ82 144 aa15.02■□□□□ -0
SMAD1-211ENST00000512019 SMCO3A2RU48 225 aa15.02■□□□□ -0
SMAD1-211ENST00000512019 RPL12P30050 165 aaKnown RBP15.02■□□□□ -0
SMAD1-211ENST00000512019 HOXD3P31249 432 aaPredicted RBP15.02■□□□□ -0
SMAD1-211ENST00000512019 AKR1C1Q04828 323 aa15.02■□□□□ -0
SMAD1-211ENST00000512019 REC114Q7Z4M0 266 aa15.02■□□□□ -0
SMAD1-211ENST00000512019 OR1S2Q8NGQ3 325 aa15.02■□□□□ -0
SMAD1-211ENST00000512019 NPIPB3Q92617 1050 aa15.02■□□□□ -0
SMAD1-211ENST00000512019 AURKAIP1Q9NWT8 199 aaPredicted RBP15.02■□□□□ -0
SMAD1-211ENST00000512019 CTSGP08311 255 aa15.01□□□□□ -0.01
SMAD1-211ENST00000512019 OR10J1P30954 320 aa15.01□□□□□ -0.01
SMAD1-211ENST00000512019 RELQ04864 619 aaPredicted RBP15.01□□□□□ -0.01
SMAD1-211ENST00000512019 ARL16Q0P5N6 197 aa15.01□□□□□ -0.01
SMAD1-211ENST00000512019 TCTE3Q8IZS6 198 aa15.01□□□□□ -0.01
SMAD1-211ENST00000512019 INO80EQ8NBZ0 244 aaPredicted RBP15.01□□□□□ -0.01
SMAD1-211ENST00000512019 ST6GAL2Q96JF0 529 aa15.01□□□□□ -0.01
SMAD1-211ENST00000512019 G3V3Q6 166 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 IGLC1P0CG04 106 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 ADMP35318 185 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 SLURP1P55000 103 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 ATP6V1FQ16864 119 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 ZNF546Q86UE3 836 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 CHRDL1Q9BU40 450 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 TMEM147Q9BVK8 224 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 HSPB11Q9Y547 144 aa15□□□□□ -0.01
SMAD1-211ENST00000512019 ZFP92A6NM28 416 aa14.99□□□□□ -0.01
SMAD1-211ENST00000512019 SMLR1H3BR10 107 aa14.99□□□□□ -0.01
SMAD1-211ENST00000512019 NHLH2Q02577 135 aa14.99□□□□□ -0.01
SMAD1-211ENST00000512019 TMEM144Q7Z5S9 345 aa14.99□□□□□ -0.01
SMAD1-211ENST00000512019 OR5C1Q8NGR4 320 aa14.99□□□□□ -0.01
SMAD1-211ENST00000512019 AQP10Q96PS8 301 aa14.99□□□□□ -0.01
SMAD1-211ENST00000512019 NPVFQ9HCQ7 196 aa14.99□□□□□ -0.01
SMAD1-211ENST00000512019 UQCC1Q9NVA1 299 aa14.99□□□□□ -0.01
SMAD1-211ENST00000512019 OR2C1O95371 312 aa14.98□□□□□ -0.01
SMAD1-211ENST00000512019 FABP1P07148 127 aa14.98□□□□□ -0.01
SMAD1-211ENST00000512019 FAM106AQ4KMX7 169 aa14.98□□□□□ -0.01
SMAD1-211ENST00000512019 GPHB5Q86YW7 130 aa14.98□□□□□ -0.01
SMAD1-211ENST00000512019 LINC00482Q8N8I6 264 aa14.98□□□□□ -0.01
SMAD1-211ENST00000512019 THAP8Q8NA92 274 aa14.98□□□□□ -0.01
SMAD1-211ENST00000512019 TNFSF18Q9UNG2 199 aa14.98□□□□□ -0.01
SMAD1-211ENST00000512019 IGKV1-17P01599 117 aa14.97□□□□□ -0.01
SMAD1-211ENST00000512019 IGLL1P15814 213 aa14.97□□□□□ -0.01
SMAD1-211ENST00000512019 KLF5Q13887 457 aaPredicted RBP14.97□□□□□ -0.01
SMAD1-211ENST00000512019 VWC2Q2TAL6 325 aa14.97□□□□□ -0.01
SMAD1-211ENST00000512019 TIGITQ495A1 244 aa14.97□□□□□ -0.01
SMAD1-211ENST00000512019 ZNF600Q6ZNG1 722 aa14.97□□□□□ -0.01
SMAD1-211ENST00000512019 TRGV9Q99603 122 aa14.97□□□□□ -0.01
SMAD1-211ENST00000512019 NDUFA4O00483 81 aa14.96□□□□□ -0.01
SMAD1-211ENST00000512019 DFFBO76075 338 aa14.96□□□□□ -0.01
SMAD1-211ENST00000512019 SYNJ2BPP57105 145 aa14.96□□□□□ -0.01
SMAD1-211ENST00000512019 YPEL3P61236 119 aaPredicted RBP14.96□□□□□ -0.01
SMAD1-211ENST00000512019 CLINT1Q14677 625 aa14.96□□□□□ -0.01
SMAD1-211ENST00000512019 TEPPQ6URK8 271 aa14.96□□□□□ -0.01
SMAD1-211ENST00000512019 DLX4Q92988 240 aaPredicted RBP14.96□□□□□ -0.01
SMAD1-211ENST00000512019 IGHV3-35A0A0C4DH35 117 aa14.95□□□□□ -0.02
SMAD1-211ENST00000512019 UBE2L5PA0A1B0GUS4 154 aa14.95□□□□□ -0.02
SMAD1-211ENST00000512019 LGALS9O00182 355 aa14.95□□□□□ -0.02
SMAD1-211ENST00000512019 OVOL1O14753 267 aa14.95□□□□□ -0.02
SMAD1-211ENST00000512019 ARPC5O15511 151 aa14.95□□□□□ -0.02
SMAD1-211ENST00000512019 ATP5SQ99766 215 aa14.95□□□□□ -0.02
SMAD1-211ENST00000512019 IGKV1D-37A0A075B6S9 117 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 IGKV1OR2-108A0A075B7D4 117 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 ZNF320A2RRD8 509 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 RNF222A6NCQ9 220 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 HMSDA8MTL9 139 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 YIF1AO95070 293 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 TOMM40O96008 361 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 CD33P20138 364 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 RAB31Q13636 194 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 Q8WTZ3 238 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 TMEM190Q8WZ59 177 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 PEMTQ9UBM1 199 aa14.94□□□□□ -0.02
SMAD1-211ENST00000512019 LSM4Q9Y4Z0 139 aaKnown RBP14.94□□□□□ -0.02
SMAD1-211ENST00000512019 PUS1Q9Y606 427 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMAD1-211ENST00000512019 RD3LP0DJH9 198 aa14.93□□□□□ -0.02
SMAD1-211ENST00000512019 AP2S1P53680 142 aaPredicted RBP14.93□□□□□ -0.02
SMAD1-211ENST00000512019 WFDC9Q8NEX5 89 aa14.93□□□□□ -0.02
SMAD1-211ENST00000512019 OR9G4Q8NGQ1 327 aa14.93□□□□□ -0.02
SMAD1-211ENST00000512019 SMIM3Q9BZL3 60 aa14.93□□□□□ -0.02
SMAD1-211ENST00000512019 MFFQ9GZY8 342 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms