RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 IGLC1P0CG04 106 aa9.85□□□□□ -0.83
RNF4-215ENST00000511843 RPL35AP18077 110 aaKnown RBP9.85□□□□□ -0.83
RNF4-215ENST00000511843 OR10J1P30954 320 aa9.85□□□□□ -0.83
RNF4-215ENST00000511843 RPL11P62913 178 aaKnown RBP9.85□□□□□ -0.83
RNF4-215ENST00000511843 RBMS2Q15434 407 aaKnown RBP9.85□□□□□ -0.83
RNF4-215ENST00000511843 FAM24BQ8N5W8 94 aa9.85□□□□□ -0.83
RNF4-215ENST00000511843 NPIPB3Q92617 1050 aa9.85□□□□□ -0.83
RNF4-215ENST00000511843 VSIRQ9H7M9 311 aa9.85□□□□□ -0.83
RNF4-215ENST00000511843 PITX3O75364 302 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 NDUFB6O95139 128 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 SLC25A4P12235 298 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 IL7P13232 177 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 NPPCP23582 126 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 BTCP35070 178 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 LRTM2Q8N967 370 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 DEDD2Q8WXF8 326 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 OVOL2Q9BRP0 275 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 MAGT1Q9H0U3 335 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 MS4A6AQ9H2W1 248 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 MAP6D1Q9H9H5 199 aa9.84□□□□□ -0.83
RNF4-215ENST00000511843 STARD9Q9P2P6 4700 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 DUXBA0A1W2PPF3 345 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 ADAP1O75689 374 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 IFNA4P05014 189 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 DEFB135Q30KP9 77 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 GGNBP1Q5YKI7 109 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 OR1S2Q8NGQ3 325 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 METTL26Q96S19 204 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 PAIP2BQ9ULR5 123 aaKnown RBP9.83□□□□□ -0.84
RNF4-215ENST00000511843 U3KQ87 197 aa9.83□□□□□ -0.84
RNF4-215ENST00000511843 TRAV30A0A087WSZ9 112 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 C9orf170A2RU37 121 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 MPTX1A8MV57 137 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 SCGB2A1O75556 95 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 ANXA7P20073 488 aaKnown RBP9.82□□□□□ -0.84
RNF4-215ENST00000511843 CRYBB3P26998 211 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 BMI1P35226 326 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 P2RY1P47900 373 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 USF2Q15853 346 aaPredicted RBP9.82□□□□□ -0.84
RNF4-215ENST00000511843 ETFRF1Q6IPR1 90 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 CACFD1Q9UGQ2 172 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 RABAC1Q9UI14 185 aa9.82□□□□□ -0.84
RNF4-215ENST00000511843 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 NAP1L6A6NFF2 107 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 DNASE2O00115 360 aaPredicted RBP9.81□□□□□ -0.84
RNF4-215ENST00000511843 WRBO00258 174 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 IL4P05112 153 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 APOC4P55056 127 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 UBE2MP61081 183 aaKnown RBP9.81□□□□□ -0.84
RNF4-215ENST00000511843 YPEL3P61236 119 aaPredicted RBP9.81□□□□□ -0.84
RNF4-215ENST00000511843 LEMD1Q68G75 181 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 NOXA1Q86UR1 476 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 STXBP6Q8NFX7 210 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 Q8WTZ3 238 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 NDUFA13Q9P0J0 144 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 TMED3Q9Y3Q3 217 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 CSMD3Q7Z407 3707 aa9.81□□□□□ -0.84
RNF4-215ENST00000511843 IGKV1D-37A0A075B6S9 117 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 H3BP45 60 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 PLA2G10O15496 165 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 HNRNPCP07910 306 aaKnown RBP eCLIP9.8□□□□□ -0.844e-7■□□□□ 10.8
RNF4-215ENST00000511843 OR4E1P0C645 316 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 RD3LP0DJH9 198 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 SLC25A6P12236 298 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 DEFB131AP59861 70 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 PAFAH1B2P68402 229 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 ZNF90Q03938 601 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 DHRS2Q13268 280 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 GAMTQ14353 236 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 LYG2Q86SG7 212 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 OR51G1Q8NGK1 321 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 TMEM231Q9H6L2 316 aa9.8□□□□□ -0.84
RNF4-215ENST00000511843 A0A1W2PS18 150 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 ZFP92A6NM28 416 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 CENPXA8MT69 81 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 SYNGR2O43760 224 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 TOMM40O96008 361 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 ZNF688P0C7X2 276 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 PSG1P11464 419 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 OR2F1Q13607 317 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 C4orf46Q504U0 113 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 STPG3Q8N7X2 389 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 NARS2Q96I59 477 aaKnown RBP9.79□□□□□ -0.84
RNF4-215ENST00000511843 PBDC1Q9BVG4 233 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 U3KQE9 123 aa9.79□□□□□ -0.84
RNF4-215ENST00000511843 PIGBOS1A0A0B4J2F0 54 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 A0A0J9YWU9 116 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 FAM90A26D6RGX4 464 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 K7EQG2 157 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 SPRY2O43597 315 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 MED6O75586 246 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 CD5P06127 495 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
RNF4-215ENST00000511843 EWSR1Q01844 656 aaKnown RBP eCLIP9.78□□□□□ -0.846e-6■□□□□ 9.2
RNF4-215ENST00000511843 SPANXN5Q5MJ07 72 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 C16orf54Q6UWD8 224 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 GSG1LQ6UXU4 331 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 GLMPQ8WWB7 406 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 GRAMD2BQ96HH9 432 aa9.78□□□□□ -0.84
RNF4-215ENST00000511843 SLC35E1Q96K37 410 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms