RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ABHD1Q96SE0 405 aa9.54□□□□□ -0.88
DDX41-210ENST00000509576 ZNF705FA8MVS1 300 aaPredicted RBP9.53□□□□□ -0.88
DDX41-210ENST00000509576 CD74P04233 296 aa9.53□□□□□ -0.88
DDX41-210ENST00000509576 ZNF705DP0CH99 300 aaPredicted RBP9.53□□□□□ -0.88
DDX41-210ENST00000509576 ZNF705BP0CI00 300 aaPredicted RBP9.53□□□□□ -0.88
DDX41-210ENST00000509576 PGAM2P15259 253 aa9.53□□□□□ -0.88
DDX41-210ENST00000509576 RND2P52198 227 aa9.53□□□□□ -0.88
DDX41-210ENST00000509576 TMEM41BQ5BJD5 291 aa9.53□□□□□ -0.88
DDX41-210ENST00000509576 FAAP20Q6NZ36 180 aa9.53□□□□□ -0.88
DDX41-210ENST00000509576 OR13C8Q8NGS7 320 aa9.53□□□□□ -0.88
DDX41-210ENST00000509576 NAA50Q9GZZ1 169 aaKnown RBP9.53□□□□□ -0.88
DDX41-210ENST00000509576 Q9H521 79 aa9.53□□□□□ -0.88
DDX41-210ENST00000509576 TMEM231Q9H6L2 316 aa9.53□□□□□ -0.88
DDX41-210ENST00000509576 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
DDX41-210ENST00000509576 A0A1W2PS18 150 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 HELTA6NFD8 242 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 BUB3O43684 328 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 FXYD7P58549 80 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 MEF2DQ14814 521 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 ZNF709Q8N972 641 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 MARCH1Q8TCQ1 289 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 GLYATL2Q8WU03 294 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 TMEM230Q96A57 120 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 GPR146Q96CH1 333 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 ZNF486Q96H40 463 aaPredicted RBP9.52□□□□□ -0.89
DDX41-210ENST00000509576 RTBDNQ9BSG5 229 aaPredicted RBP9.52□□□□□ -0.89
DDX41-210ENST00000509576 FUNDC2Q9BWH2 189 aa9.52□□□□□ -0.89
DDX41-210ENST00000509576 WDR12Q9GZL7 423 aaKnown RBP9.52□□□□□ -0.89
DDX41-210ENST00000509576 IGLV2-18A0A075B6J9 118 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 CORTO00230 105 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 CDS2O95674 445 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
DDX41-210ENST00000509576 OR5AC1P0C628 307 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 S100GP29377 79 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 C2orf83Q53S99 150 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 PRR13Q9NZ81 148 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 MTFP1Q9UDX5 166 aa9.51□□□□□ -0.89
DDX41-210ENST00000509576 IGKV1D-37A0A075B6S9 117 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 SOCS3O14543 225 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 IL4P05112 153 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 OR10J1P30954 320 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 SPCS3P61009 180 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 YPEL3P61236 119 aaPredicted RBP9.5□□□□□ -0.89
DDX41-210ENST00000509576 TRIM16LQ309B1 348 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 LGALS9BQ3B8N2 356 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 RNASE10Q5GAN6 216 aaKnown RBP9.5□□□□□ -0.89
DDX41-210ENST00000509576 SELENOHQ8IZQ5 122 aaKnown RBP9.5□□□□□ -0.89
DDX41-210ENST00000509576 OR1S2Q8NGQ3 325 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 NPIPB3Q92617 1050 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 TMEM222Q9H0R3 208 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 MIXL1Q9H2W2 232 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 CACNG5Q9UF02 275 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
DDX41-210ENST00000509576 IGKV3-20P01619 116 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 P0DMU3 169 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 SUB1P53999 127 aaKnown RBP eCLIP9.49□□□□□ -0.89
DDX41-210ENST00000509576 C1orf158Q8N1D5 194 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 ARRDC1Q8N5I2 433 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 OR52E5Q8NH55 327 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 TERB2Q8NHR7 220 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 NEU1Q99519 415 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 NDUFAF3Q9BU61 184 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 SLC35B3Q9H1N7 401 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 NRN1Q9NPD7 142 aa9.49□□□□□ -0.89
DDX41-210ENST00000509576 TRAV30A0A087WSZ9 112 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 F6UB75 175 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 TOMM40O96008 361 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 PRM2P04554 102 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 PSG1P11464 419 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 EMP1P54849 157 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 SIGLEC15Q6ZMC9 328 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 SLC24A4Q8NFF2 622 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 OR51G1Q8NGK1 321 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 PDCD10Q9BUL8 212 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 DKK2Q9UBU2 259 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 DNAH5Q8TE73 4624 aa9.48□□□□□ -0.89
DDX41-210ENST00000509576 SMIM31A0A1B0GVY4 71 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 HTR2BP41595 481 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 CTF1Q16619 201 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 NMSQ5H8A3 153 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 Q8WTZ3 238 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 RRNAD1Q96FB5 475 aaKnown RBP9.47□□□□□ -0.89
DDX41-210ENST00000509576 ACY3Q96HD9 319 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 C20orf173Q96LM9 149 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 NAA60Q9H7X0 242 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 HEYLQ9NQ87 328 aaPredicted RBP9.47□□□□□ -0.89
DDX41-210ENST00000509576 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.47□□□□□ -0.89
DDX41-210ENST00000509576 COPZ2Q9P299 210 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 EXTL2Q9UBQ6 330 aa9.47□□□□□ -0.89
DDX41-210ENST00000509576 TEX13DA0A0J9YY54 714 aaPredicted RBP9.46□□□□□ -0.9
DDX41-210ENST00000509576 SLC25A4P12235 298 aa9.46□□□□□ -0.9
DDX41-210ENST00000509576 NKX2-1P43699 371 aaPredicted RBP9.46□□□□□ -0.9
DDX41-210ENST00000509576 ZNF90Q03938 601 aa9.46□□□□□ -0.9
DDX41-210ENST00000509576 ZNF79Q15937 498 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms