RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TNFRSF9Q07011 255 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 SMCO1Q147U7 214 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 NMSQ5H8A3 153 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 LGI3Q8N145 548 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 STPG3Q8N7X2 389 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 OR1S1Q8NH92 325 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 ACY3Q96HD9 319 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 LYSTQ99698 3801 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 MS4A6AQ9H2W1 248 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 RBKSQ9H477 322 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 VSIRQ9H7M9 311 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 RABAC1Q9UI14 185 aa10.95□□□□□ -0.66
UBE2D3-228ENST00000508974 A0A0B4J2A0 478 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 A0A0J9YWU9 116 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 LCE6AA0A183 80 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 IGKV1-17P01599 117 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 VAMP1P23763 118 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 CCR6P51684 374 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 LEMD1Q68G75 181 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 PRSS54Q6PEW0 395 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 CCDC190Q86UF4 302 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 FAM24BQ8N5W8 94 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 STXBP6Q8NFX7 210 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 DTD1Q8TEA8 209 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 METTL26Q96S19 204 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 SHPKQ9UHJ6 478 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 RYR2Q92736 4967 aa10.94□□□□□ -0.66
UBE2D3-228ENST00000508974 TRAV30A0A087WSZ9 112 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 IGLC1P0CG04 106 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 OR10J1P30954 320 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 PMS2P11Q13670 270 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 RBMS2Q15434 407 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 Q6ZWC4 215 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 IL17DQ8TAD2 202 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 RNASEH2CQ8TDP1 164 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 NPIPB3Q92617 1050 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 TMEM231Q9H6L2 316 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 PGPEP1Q9NXJ5 209 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 HSPB7Q9UBY9 170 aa10.93□□□□□ -0.66
UBE2D3-228ENST00000508974 SACSQ9NZJ4 4579 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 SLC25A4P12235 298 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 P2RY1P47900 373 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 DEFB131AP59861 70 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 SRPXP78539 464 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 EWSR1Q01844 656 aaKnown RBP eCLIP10.92□□□□□ -0.665e-7■■■■■ 34.3
UBE2D3-228ENST00000508974 TMEM128Q5BJH2 165 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 SPANXN2Q5MJ10 180 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 LYG2Q86SG7 212 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 OR1S2Q8NGQ3 325 aa10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 NARS2Q96I59 477 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-228ENST00000508974 KIR2DL5BA0A0G2JN68 375 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 KIR2DL5BA0A0G2JPC4 375 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 LINC00854A0A1B0GVQ3 168 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 A0A1W2PS18 150 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 UBE2CO00762 179 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 IFNA4P05014 189 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 IL4P05112 153 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 CD5P06127 495 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 IAPPP10997 89 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 CRYBB3P26998 211 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 INPP1P49441 399 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 CMC4P56277 68 aaPredicted RBP10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 PPP1R1AQ13522 171 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 ETFRF1Q6IPR1 90 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 KIR2DL5AQ8N109 375 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 KIR2DL5BQ8NHK3 375 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 Q8WTZ3 238 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 RNF183Q96D59 192 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 PAIP2BQ9ULR5 123 aaKnown RBP10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 TP53TG1Q9Y2A0 90 aa10.91□□□□□ -0.66
UBE2D3-228ENST00000508974 CXorf65A6NEN9 183 aa10.9□□□□□ -0.66
UBE2D3-228ENST00000508974 USF2Q15853 346 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-228ENST00000508974 NOXA1Q86UR1 476 aa10.9□□□□□ -0.66
UBE2D3-228ENST00000508974 GRAMD2BQ96HH9 432 aa10.9□□□□□ -0.66
UBE2D3-228ENST00000508974 SRRQ9GZT4 340 aa10.9□□□□□ -0.66
UBE2D3-228ENST00000508974 CSTL1Q9H114 145 aa10.9□□□□□ -0.66
UBE2D3-228ENST00000508974 CACFD1Q9UGQ2 172 aa10.9□□□□□ -0.66
UBE2D3-228ENST00000508974 MPTX1A8MV57 137 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 SFT2D2O95562 160 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 CA1P00915 261 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 HNRNPCP07910 306 aaKnown RBP eCLIP10.89□□□□□ -0.674e-11■■□□□ 14.1
UBE2D3-228ENST00000508974 HOXB5P09067 269 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 ZNF688P0C7X2 276 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 YPEL3P61236 119 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 BAK1Q16611 211 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 TRIQKQ629K1 86 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 CENPSQ8N2Z9 138 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 SLC25A21Q9BQT8 299 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 MAGT1Q9H0U3 335 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 U3KQ87 197 aa10.89□□□□□ -0.67
UBE2D3-228ENST00000508974 AGRNO00468 2067 aa10.88□□□□□ -0.67
UBE2D3-228ENST00000508974 DUXBA0A1W2PPF3 345 aa10.88□□□□□ -0.67
UBE2D3-228ENST00000508974 K7EQG2 157 aa10.88□□□□□ -0.67
UBE2D3-228ENST00000508974 ZNF701M0R085 212 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-228ENST00000508974 RD3LP0DJH9 198 aa10.88□□□□□ -0.67
UBE2D3-228ENST00000508974 DHRS2Q13268 280 aa10.88□□□□□ -0.67
UBE2D3-228ENST00000508974 PBDC1Q9BVG4 233 aa10.88□□□□□ -0.67
UBE2D3-228ENST00000508974 TRAV2A0A0B4J234 112 aa10.87□□□□□ -0.67
UBE2D3-228ENST00000508974 ZFP92A6NM28 416 aa10.87□□□□□ -0.67
UBE2D3-228ENST00000508974 KNCNA6PVL3 124 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms