RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RLN2P04090 185 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 PET100P0DJ07 73 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 DEFA4P12838 97 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 SPNP16150 400 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 PVALBP20472 110 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 HOXA1P49639 335 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 RUNX1Q01196 453 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 WT1-ASQ06250 92 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 EXOSC2Q13868 293 aaKnown RBP4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 IZUMO4Q1ZYL8 232 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 BSXQ3C1V8 233 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 C2orf83Q53S99 150 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 C10orf55Q5SWW7 151 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 PVRIGQ6DKI7 326 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 ZNF329Q86UD4 541 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 ZNF491Q8N8L2 437 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 ZBTB8BQ8NAP8 495 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 TMEM116Q8NCL8 245 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR5T1Q8NG75 326 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR4D5Q8NGN0 318 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 VN1R17PQ8TDU5 208 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 DTD1Q8TEA8 209 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 RBMXL1Q96E39 390 aaKnown RBP4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 RAB40CQ96S21 281 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 HINT2Q9BX68 163 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 MED28Q9H204 178 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 ZNF355PQ9NSJ1 428 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 LINC00527Q9UJ94 153 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 ALG5Q9Y673 324 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 IGLV11-55A0A075B6I3 123 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 TRBV7-1A0A0A6YYK4 115 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 RPS10-NUDT3A0A1W2PQS6 291 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 FAM25EA8MYX2 175 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 SOX15O60248 233 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 TSC22D2O75157 780 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 SCGB2A1O75556 95 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 TRGV3P03979 118 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 MYOD1P15172 320 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 AREGP15514 252 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 NPY1RP25929 384 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 FCGR2BP31994 310 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 TPPP2P59282 170 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 KRTAP10-11P60412 298 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 RRAS2P62070 204 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 RAB11AP62491 216 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 RPL23AP62750 156 aaKnown RBP4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 ATP5G2Q06055 141 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 FGL1Q08830 312 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 IL15RAQ13261 267 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 C2orf68Q2NKX9 166 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 ETFRF1Q6IPR1 90 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 SLC25A24Q6NUK1 477 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 SLC24A4Q8NFF2 622 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR4F17Q8NGA8 305 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR10W1Q8NGF6 305 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 RNASEH2CQ8TDP1 164 aaKnown RBP4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 C4orf3Q8WVX3 66 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 SMIM8Q96KF7 97 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR10C1Q96KK4 312 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR4F4Q96R69 305 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 P2RX4Q99571 388 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 TXN2Q99757 166 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 RBKSQ9H477 322 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 GSKIPQ9P0R6 139 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 NOTCH3Q9UM47 2321 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
HMGB1P44-201ENST00000508597 TRAV30A0A087WSZ9 112 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 MPTX1A8MV57 137 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 L7N2F9 121 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 M0QZ24 198 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 GOSR2O14653 212 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 IFNA10P01566 189 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 HSPB1P04792 205 aaKnown RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 LGALS1P09382 135 aaKnown RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 RNASE2P10153 161 aaKnown RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 CD28P10747 220 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 SLC25A4P12235 298 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 GPX4P36969 197 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 MYCNOSP40205 109 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 NPBWR1P48145 328 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 RHOGP84095 191 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 KIAA0141Q14154 515 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 C15orf32Q32M92 178 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 TCTEX1D4Q5JR98 221 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 ZNF343Q6P1L6 599 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 SPSB3Q6PJ21 355 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 CACNG8Q8WXS5 425 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 TAF15Q92804 592 aaKnown RBP eCLIP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 EEF1AKMT3Q96AZ1 226 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 TMEM18Q96B42 140 aa4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 CITED2Q99967 270 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 RANGRFQ9HD47 186 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 STRAPQ9Y3F4 350 aaKnown RBP4.23□□□□□ -1.73
HMGB1P44-201ENST00000508597 A8MZ25 164 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 E5RGE8 158 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 FNDC10F2Z333 226 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 I3L2K1 104 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 I3L521 148 aa4.22□□□□□ -1.73
HMGB1P44-201ENST00000508597 K7EPK0 472 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms