RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 KCNG3Q8TAE7 436 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 DYNLRB2Q8TF09 96 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 RDH12Q96NR8 316 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 ROPN1BQ9BZX4 212 aaPredicted RBP1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 VCX2Q9H322 139 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 GORASP2Q9H8Y8 452 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 CACYBPQ9HB71 228 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 RPRD1BQ9NQG5 326 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 RBFOX1Q9NWB1 397 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 TAS2R1Q9NYW7 299 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 VAPAQ9P0L0 249 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 MRM2Q9UI43 246 aaKnown RBP1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 IKZF2Q9UKS7 526 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 MED31Q9Y3C7 131 aa1.88□□□□□ -2.11
TOPBP1-206ENST00000508524 A0A087WUU8 490 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 TRGV10A0A0A0MS01 117 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 IGHV3-49A0A0A0MS15 119 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 KBTBD11-OT1A0A1B0GTJ5 212 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 EFCAB9A8MZ26 197 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 KRBOX1C9JBD0 128 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 PPP5D1E7EU14 171 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 NUPL2O15504 423 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 ENTPD6O75354 484 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 IFNA21P01568 189 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 IFNA17P01571 189 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 IL6P05231 212 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 HIST1H1CP16403 213 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 CBLN1P23435 193 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 ERP29P30040 261 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 TAS2R41P59536 307 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 FADDQ13158 208 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 RPEL1Q2QD12 228 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 ANKDD1AQ495B1 522 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 ACTBL2Q562R1 376 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 PLCXD3Q63HM9 321 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 CD200R1LQ6Q8B3 271 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 UNQ5815/PRO19632Q6UWF5 114 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 OR5T1Q8NG75 326 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 OR5A2Q8NGI9 324 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 OR4K13Q8NH42 304 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 OR4A5Q8NH83 315 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNF502Q8TBZ5 544 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 HAVCR2Q8TDQ0 301 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 ACMSDQ8TDX5 336 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 GPX7Q96SL4 187 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 SAMD10Q9BYL1 202 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 NSRP1Q9H0G5 558 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 GAL3ST2Q9H3Q3 398 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 FBXL15Q9H469 300 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 LINC00574Q9H8X3 128 aa1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 PEF1Q9UBV8 284 aaKnown RBP1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 AMMECR1Q9Y4X0 333 aaPredicted RBP1.87□□□□□ -2.11
TOPBP1-206ENST00000508524 IGHV3-43A0A0B4J1X8 118 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 IGKV1-12A0A0C4DH73 117 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNF729A6NN14 1252 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 NDUFA3O95167 84 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 OR2H2O95918 312 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 IFNA14P01570 189 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 IGKV1D-12P01611 117 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 IGLV3-1P01715 115 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 PRH1P02810 166 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 GYPBP06028 91 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 APELAP0DMC3 54 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 GPX2P18283 190 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 CRABP1P29762 137 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 PHBP35232 272 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 NAA20P61599 178 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 CDK5R1Q15078 307 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNF726P1Q15940 193 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 CCDC153Q494R4 210 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 TMEM42Q69YG0 159 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 Q6ZSR3 168 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 FUNDC1Q8IVP5 155 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNF439Q8NDP4 499 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 SPATA4Q8NEY3 305 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 OR4D6Q8NGJ1 314 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 OR10X1Q8NGY0 326 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 RNF133Q8WVZ7 376 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 CEP19Q96LK0 163 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 ERMAPQ96PL5 475 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 CHCHD7Q9BUK0 85 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 MRPL20Q9BYC9 149 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 FGF20Q9NP95 211 aaPredicted RBP1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 IDI2-AS1Q9NZ38 188 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 SAMHD1Q9Y3Z3 626 aaKnown RBP1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 LINC00588Q9Y4M8 146 aa1.86□□□□□ -2.11
TOPBP1-206ENST00000508524 C15orf65H3BRN8 121 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNF593O00488 134 aaPredicted RBP1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 SERPINB7O75635 380 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 NDUFB2O95178 105 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 SHBGP04278 402 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 EIF4EP06730 217 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 TCP1P17987 556 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 PPIBP23284 216 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 GZMMP51124 257 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 ZNF137PP52743 207 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 MTPNP58546 118 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 PLP1P60201 277 aa1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 RPL23P62829 140 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-206ENST00000508524 CAV1Q03135 178 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms