RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 P2RY4P51582 365 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 KRTAP10-9P60411 292 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 CKS1BP61024 79 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 RPL32P62910 135 aaKnown RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 PIGYQ3MUY2 71 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 PRR31Q5SQ13 230 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM200BQ69YZ2 307 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 FUNDC1Q8IVP5 155 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TCTEX1D1Q8N7M0 179 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 LRRC75AQ8NAA5 344 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 OR51G1Q8NGK1 321 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SLC25A38Q96DW6 304 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 EDA2RQ9HAV5 297 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 FAM206AQ9NX38 181 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 IL36RNQ9UBH0 155 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 LOC389332A0A1B0GUA5 103 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 MAP1LC3B2A6NCE7 125 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 OR4C45A6NMZ5 311 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 H7C2G1 150 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ATP5LO75964 103 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 AMY1AP04745 511 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 CD24P25063 80 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 CFHR2P36980 270 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 DAD1P61803 113 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SNRPEP62304 92 aaKnown RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 PSG7Q13046 419 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SSX1Q16384 188 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF324BQ6AW86 544 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 LDLRAD3Q86YD5 345 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 FAM216BQ8N7L0 139 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SFRP2Q96HF1 295 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 MAP1LC3BQ9GZQ8 125 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 EXPH5Q8NEV8 1989 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 PKD1L2Q7Z442 2459 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TRAV14DV4A0A0A6YYC5 116 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 H3BRM9 83 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 H3BVH4 76 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF737O75373 536 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 CDS2O95674 445 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SMIM18P0DKX4 95 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 UCP1P25874 307 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ASIPP42127 132 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SRSF1Q07955 248 aaKnown RBP eCLIP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 C5orf47Q569G3 176 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM229BQ8NBD8 167 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 OSR1Q8TAX0 266 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 PHLDA1Q8WV24 401 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 NDUFAF3Q9BU61 184 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 C1QTNF5Q9BXJ0 243 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 ZNF430Q9H8G1 570 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-208ENST00000508342 SDF2L1Q9HCN8 221 aa2.44□□□□□ -2.02
NEDD4-208ENST00000508342 DSCAMO60469 2012 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 FOXI3A8MTJ6 420 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-208ENST00000508342 F8WEM9 126 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 M0R381 172 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 CTDSPLO15194 276 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 CD74P04233 296 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 IGHV4-38-2P0DP08 117 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 SELLP14151 372 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 MMP9P14780 707 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 KIAA0040Q15053 153 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 MINOS1Q5TGZ0 78 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 MAVSQ7Z434 540 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 SDHCQ99643 169 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-208ENST00000508342 SOSTQ9BQB4 213 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 CHST5Q9GZS9 411 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 LPAR5Q9H1C0 372 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 PROK2Q9HC23 129 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 CCL28Q9NRJ3 127 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 HSPB8Q9UJY1 196 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 MINOS1-NBL1R4GNA1 71 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 A0A087WWL8 130 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 TGIF2-C20orf24A0A0A6YYL0 155 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 TRBV7-9A0A0J9YWB2 115 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 IFITM10A6NMD0 228 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 TMEM250H0YL14 139 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 CD7P09564 240 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 LGALS3P17931 250 aaKnown RBP2.43□□□□□ -2.02
NEDD4-208ENST00000508342 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-208ENST00000508342 ASPHD2Q6ICH7 369 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 OR5AN1Q8NGI8 311 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 PPP1R1CQ8WVI7 109 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 NABP1Q96AH0 204 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 NAT8Q9UHE5 227 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 TRAPPC1Q9Y5R8 145 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 TRAV1-2A0A0B4J238 106 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 ANKRD20A5PA0PJZ0 165 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 HMX2A2RU54 273 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 CLPSL1A2RUU4 121 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 RBMY1BA6NDE4 496 aaKnown RBP2.43□□□□□ -2.02
NEDD4-208ENST00000508342 RBMY1EA6NEQ0 496 aaKnown RBP2.43□□□□□ -2.02
NEDD4-208ENST00000508342 ZAR1LA6NP61 321 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 CXorf1O96002 111 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 RBMY1DP0C7P1 496 aaKnown RBP2.43□□□□□ -2.02
NEDD4-208ENST00000508342 RBMY1A1P0DJD3 496 aaKnown RBP2.43□□□□□ -2.02
NEDD4-208ENST00000508342 RBMY1CP0DJD4 496 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 OR10J1P30954 320 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 LEPP41159 167 aa2.43□□□□□ -2.02
NEDD4-208ENST00000508342 HIST1H3AP68431 136 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms