RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 SHANK2-AS3Q9BTD1 123 aa2.73□□□□□ -1.97
GYPA-205ENST00000508337 TNS3Q68CZ2 1445 aa2.73□□□□□ -1.97
GYPA-205ENST00000508337 FMN1Q68DA7 1419 aa2.73□□□□□ -1.97
GYPA-205ENST00000508337 ERBINQ96RT1 1412 aa2.73□□□□□ -1.97
GYPA-205ENST00000508337 CABIN1Q9Y6J0 2220 aa2.73□□□□□ -1.97
GYPA-205ENST00000508337 CECR2Q9BXF3 1484 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 BAZ1BQ9UIG0 1483 aaKnown RBP2.72□□□□□ -1.97
GYPA-205ENST00000508337 TRAV30A0A087WSZ9 112 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 TRAV13-1A0A0B4J241 112 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 IGHV7-4-1A0A0J9YVY3 117 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 FAM236AA0A1B0GUQ0 79 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 FAM236BA0A1B0GV22 79 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 MEIS3P1A6NDR6 274 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 A6NED7 52 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 DISP2A7MBM2 1401 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 BUB1B-PAK6H3BSN5 160 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 IGKV1-5P01602 117 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 ZNF688P0C7X2 276 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 RNASE2P10153 161 aaKnown RBP2.72□□□□□ -1.97
GYPA-205ENST00000508337 CRYBB3P26998 211 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 SRP14P37108 136 aaKnown RBP2.72□□□□□ -1.97
GYPA-205ENST00000508337 FGF12P61328 243 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 CCL20P78556 96 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 ZNF816Q0VGE8 651 aaPredicted RBP2.72□□□□□ -1.97
GYPA-205ENST00000508337 FAM135BQ49AJ0 1406 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 AMTNQ6UX39 209 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 SSH2Q76I76 1423 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 TRAPPC6BQ86SZ2 158 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 C3orf22Q8N5N4 141 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 OR5D14Q8NGL3 314 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 OR8D4Q8NGM9 314 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 LINC01560Q8TB33 94 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 RPS4Y2Q8TD47 263 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 TMEM106AQ96A25 262 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 OR4C12Q96R67 309 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 RNF5Q99942 180 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 MRPL57Q9BQC6 102 aaKnown RBP2.72□□□□□ -1.97
GYPA-205ENST00000508337 DERL1Q9BUN8 251 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 C1QTNF6Q9BXI9 259 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 BANF2Q9H503 90 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 Q9H521 79 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 IL36BQ9NZH7 164 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 BOKQ9UMX3 212 aaPredicted RBP2.72□□□□□ -1.97
GYPA-205ENST00000508337 FUT9Q9Y231 359 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 DCAF1Q9Y4B6 1507 aa2.72□□□□□ -1.97
GYPA-205ENST00000508337 VPS8Q8N3P4 1428 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 IRGMA1A4Y4 181 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 A8MWL6 223 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 LEUTXA8MZ59 168 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 ZNF670-ZNF695F2Z2N8 137 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 TMEM256-PLSCR3K7ERE1 68 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 K7ERS5 55 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 SOCS1O15524 211 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 ZNF728P0DKX0 622 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 GNG4P50150 75 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 FOXA3P55318 350 aaPredicted RBP2.71□□□□□ -1.98
GYPA-205ENST00000508337 ARPP19P56211 112 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 RHOGP84095 191 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 MEF2BQ02080 365 aaPredicted RBP2.71□□□□□ -1.98
GYPA-205ENST00000508337 KRTAP13-2Q52LG2 175 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 ZNF678Q5SXM1 525 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 OR5A2Q8NGI9 324 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 OR5H6Q8NGV6 325 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 ITLN2Q8WWU7 325 aaPredicted RBP2.71□□□□□ -1.98
GYPA-205ENST00000508337 PP6455Q8WZ26 134 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 RBPMSQ93062 196 aaKnown RBP2.71□□□□□ -1.98
GYPA-205ENST00000508337 MGLLQ99685 303 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 SLC39A9Q9NUM3 307 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 C21orf62Q9NYP8 219 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 PHLDA3Q9Y5J5 127 aa2.71□□□□□ -1.98
GYPA-205ENST00000508337 RIMS1Q86UR5 1692 aaKnown RBP2.71□□□□□ -1.98
GYPA-205ENST00000508337 SPEF2Q9C093 1822 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 FAM135AQ9P2D6 1515 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 GPATCH8Q9UKJ3 1502 aaKnown RBP2.7□□□□□ -1.98
GYPA-205ENST00000508337 IFITM5A6NNB3 132 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 LY6LH3BQJ8 138 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 M0R129 80 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 BPY2O14599 106 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 HRASP01112 189 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 KRASP01116 189 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 HLA-DQA1P01909 254 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 APODP05090 189 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 HLA-EP13747 358 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 RPL22P35268 128 aaKnown RBP2.7□□□□□ -1.98
GYPA-205ENST00000508337 S100A10P60903 97 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 HBBP68871 147 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 HSD17B12Q53GQ0 312 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 COL5A1-AS1Q5SY13 56 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 MORN3Q6PF18 240 aaPredicted RBP2.7□□□□□ -1.98
GYPA-205ENST00000508337 SPATA12Q7Z6I5 190 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 MSRB3Q8IXL7 192 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 WFDC11Q8NEX6 87 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 WFDC5Q8TCV5 224 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 MAGOHBQ96A72 148 aaKnown RBP2.7□□□□□ -1.98
GYPA-205ENST00000508337 CIB3Q96Q77 187 aaPredicted RBP2.7□□□□□ -1.98
GYPA-205ENST00000508337 ADAT1Q9BUB4 502 aaKnown RBP2.7□□□□□ -1.98
GYPA-205ENST00000508337 SNHG12Q9BXW3 62 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 GABARAPL1Q9H0R8 117 aa2.7□□□□□ -1.98
GYPA-205ENST00000508337 ADAMTS13Q76LX8 1427 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 203.6 ms