RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 NHP2Q9NX24 153 aaKnown RBP8.78□□□□□ -1
PDLIM5-210ENST00000508216 PSENENQ9NZ42 101 aa8.78□□□□□ -1
PDLIM5-210ENST00000508216 C15orf62A8K5M9 175 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 A8MWV9 139 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 NPIPB6E9PJ23 425 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 H3BSH0 61 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 K7EQS6 105 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 RRHO14718 337 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 BCL3P20749 454 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 EBI3Q14213 229 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 CIARTQ8N365 385 aaPredicted RBP8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 C10orf126Q8N4M7 172 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 PCNX3Q9H6A9 2034 aa8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 TDRD6O60522 2096 aaKnown RBP8.77□□□□□ -1.01
PDLIM5-210ENST00000508216 ARHGAP21Q5T5U3 1957 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 THADAQ6YHU6 1953 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 UBE2L5PA0A1B0GUS4 154 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 MGST1P10620 155 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 HOXB4P17483 251 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 UBE2D3P61077 147 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 UBE2D2P62837 147 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 SRYQ05066 204 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 ADAMTSL4Q6UY14 1074 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 APRG1Q8IVJ8 170 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 ZNF740Q8NDX6 193 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 NPIPB3Q92617 1050 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 A8MWL6 223 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 ZNF561-AS1K7EIQ3 104 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 K7ERJ3 54 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 P04436 131 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 HLA-DMBP28068 263 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 PPP1CAP62136 330 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 TXNDC8Q6A555 127 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 C20orf204Q6ZNR8 217 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 GJC3Q8NFK1 279 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 C20orf173Q96LM9 149 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 LINC00477Q96M19 166 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 NPCDR1Q9BY65 106 aa8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 HEYLQ9NQ87 328 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-210ENST00000508216 IGLV1-36A0A0B4J1U3 117 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 A0A0D9SEW6 157 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 MPDU1O75352 247 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 CCL1P22362 96 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 RPL13AP40429 203 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 CTXN1P60606 82 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 GDF5OSQ5U4N7 250 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 TBC1D26Q86UD7 250 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 PLEKHB2Q96CS7 222 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 JPT2Q9H910 190 aa8.75□□□□□ -1.01
PDLIM5-210ENST00000508216 PTPRSQ13332 1948 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 OOSP1A8MZH6 123 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 C16orf97H3BN30 126 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 PRRG2O14669 202 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 TM4SF5O14894 197 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 HRCT1Q6UXD1 115 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 ODF3Q96PU9 254 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 C1orf43Q9BWL3 253 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 PRDM6Q9NQX0 595 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 C19orf25Q9UFG5 118 aaPredicted RBP8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 TP53TG1Q9Y2A0 90 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 RAXQ9Y2V3 346 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 SIT1Q9Y3P8 196 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 ATG2BQ96BY7 2078 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 HEATR5BQ9P2D3 2071 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 PTPRBP23467 1997 aa8.74□□□□□ -1.01
PDLIM5-210ENST00000508216 FRG2CA6NGY1 282 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 SH2D7A6NKC9 451 aaPredicted RBP8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 OVOL1O14753 267 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 MGST3O14880 152 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 LMX1BO60663 402 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 SCGB1C2P0DMR2 95 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 CLDN2P57739 230 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 Q6ZQT7 251 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 LINC00336Q6ZUF6 198 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 Q96M66 194 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 SLC25A2Q9BXI2 301 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 PDE4DIPQ5VU43 2346 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 A0A1W2PQH9 124 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 GHRHP01286 108 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 MFAP2P55001 183 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 PLGLB1Q02325 96 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 C4orf26Q17RF5 130 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 CENPWQ5EE01 88 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 C6orf201Q7Z4U5 140 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 SP8Q8IXZ3 490 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 POM121L12Q8N7R1 296 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 SAP25Q8TEE9 199 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 TIMD4Q96H15 378 aa8.73□□□□□ -1.01
PDLIM5-210ENST00000508216 KIAA1549LQ6ZVL6 1849 aa8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 H3BP45 60 aa8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 LY6LH3BQJ8 138 aa8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 FXYD4P59646 89 aa8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 FAM53BQ14153 422 aa8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 GAGE2AQ6NT46 116 aa8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 RPRMLQ8N4K4 120 aa8.72□□□□□ -1.01
PDLIM5-210ENST00000508216 ZNF808Q8N4W9 903 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms