RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 OR1S2Q8NGQ3 325 aa13.75□□□□□ -0.21
FGFR3-209ENST00000507588 MCFD2Q8NI22 146 aa13.75□□□□□ -0.21
FGFR3-209ENST00000507588 TMEM170AQ8WVE7 144 aa13.75□□□□□ -0.21
FGFR3-209ENST00000507588 SHPKQ9UHJ6 478 aa13.75□□□□□ -0.21
FGFR3-209ENST00000507588 KMT2AQ03164 3969 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 FABP12A6NFH5 140 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 MPTX1A8MV57 137 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 DNASE2O00115 360 aaPredicted RBP13.74□□□□□ -0.21
FGFR3-209ENST00000507588 NPY1RP25929 384 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 SUPT4H1P63272 117 aaKnown RBP13.74□□□□□ -0.21
FGFR3-209ENST00000507588 TIGITQ495A1 244 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 FAM24BQ8N5W8 94 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 TMEM217Q8N7C4 229 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 TRIM63Q969Q1 353 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 MCUBQ9NWR8 336 aa13.74□□□□□ -0.21
FGFR3-209ENST00000507588 CXorf65A6NEN9 183 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 FAUP35544 74 aaKnown RBP13.73□□□□□ -0.21
FGFR3-209ENST00000507588 P2RY1P47900 373 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 RND2P52198 227 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 DEFB131AP59861 70 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 YPEL3P61236 119 aaPredicted RBP13.73□□□□□ -0.21
FGFR3-209ENST00000507588 SRPXP78539 464 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 PMS2P11Q13670 270 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 NOXA1Q86UR1 476 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 GRAMD2BQ96HH9 432 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 NARS2Q96I59 477 aaKnown RBP13.73□□□□□ -0.21
FGFR3-209ENST00000507588 PRR13Q9NZ81 148 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 HSPB7Q9UBY9 170 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 BIRC6Q9NR09 4857 aa13.73□□□□□ -0.21
FGFR3-209ENST00000507588 K7EQG2 157 aa13.72□□□□□ -0.21
FGFR3-209ENST00000507588 OR10J1P30954 320 aa13.72□□□□□ -0.21
FGFR3-209ENST00000507588 CCR6P51684 374 aa13.72□□□□□ -0.21
FGFR3-209ENST00000507588 RPL11P62913 178 aaKnown RBP13.72□□□□□ -0.21
FGFR3-209ENST00000507588 KLF9Q13886 244 aaPredicted RBP13.72□□□□□ -0.21
FGFR3-209ENST00000507588 SMCO1Q147U7 214 aa13.72□□□□□ -0.21
FGFR3-209ENST00000507588 ETFRF1Q6IPR1 90 aa13.72□□□□□ -0.21
FGFR3-209ENST00000507588 LINC00476Q8WZB0 136 aa13.72□□□□□ -0.21
FGFR3-209ENST00000507588 U3KQE9 123 aa13.72□□□□□ -0.21
FGFR3-209ENST00000507588 PIGBOS1A0A0B4J2F0 54 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 NXPH3O95157 252 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 ANXA3P12429 323 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 AKR1C4P17516 323 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 LEMD1Q68G75 181 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 LGI3Q8N145 548 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 DCANP1Q8TF63 244 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 C11orf68Q9H3H3 251 aaKnown RBP13.71□□□□□ -0.21
FGFR3-209ENST00000507588 RABAC1Q9UI14 185 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 U3KQ87 197 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 V9GYH0 126 aa13.71□□□□□ -0.21
FGFR3-209ENST00000507588 DUXBA0A1W2PPF3 345 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 CA1P00915 261 aaPredicted RBP13.7□□□□□ -0.22
FGFR3-209ENST00000507588 HNRNPCP07910 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
FGFR3-209ENST00000507588 AP3S2P59780 193 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 CEMP1Q6PRD7 247 aaPredicted RBP13.7□□□□□ -0.22
FGFR3-209ENST00000507588 LYZL2Q7Z4W2 148 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 STXBP6Q8NFX7 210 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 DTD1Q8TEA8 209 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 Q8WTZ3 238 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 GLMPQ8WWB7 406 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 DEDD2Q8WXF8 326 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 RARRES2Q99969 163 aa13.7□□□□□ -0.22
FGFR3-209ENST00000507588 EIF2B2P49770 351 aaKnown RBP13.69□□□□□ -0.22
FGFR3-209ENST00000507588 RBMS2Q15434 407 aaKnown RBP13.69□□□□□ -0.22
FGFR3-209ENST00000507588 USF2Q15853 346 aaPredicted RBP13.69□□□□□ -0.22
FGFR3-209ENST00000507588 HELTA6NFD8 242 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 TOMM40O96008 361 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 IFNA10P01566 189 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 IL4P05112 153 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 ATP5IP56385 69 aaPredicted RBP13.68□□□□□ -0.22
FGFR3-209ENST00000507588 ZNF79Q15937 498 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 TMEM128Q5BJH2 165 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 C16orf54Q6UWD8 224 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
FGFR3-209ENST00000507588 STHQ8IWL8 128 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 TOMM5Q8N4H5 51 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 NPIPB3Q92617 1050 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 RBKSQ9H477 322 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 DNAH6Q9C0G6 4158 aa13.68□□□□□ -0.22
FGFR3-209ENST00000507588 ZNF688P0C7X2 276 aa13.67□□□□□ -0.22
FGFR3-209ENST00000507588 PYDC2Q56P42 97 aa13.67□□□□□ -0.22
FGFR3-209ENST00000507588 TMEM41BQ5BJD5 291 aa13.67□□□□□ -0.22
FGFR3-209ENST00000507588 LRTM2Q8N967 370 aa13.67□□□□□ -0.22
FGFR3-209ENST00000507588 OR11H2Q8NH07 326 aa13.67□□□□□ -0.22
FGFR3-209ENST00000507588 ACY3Q96HD9 319 aa13.67□□□□□ -0.22
FGFR3-209ENST00000507588 RBM38Q9H0Z9 239 aaKnown RBP13.67□□□□□ -0.22
FGFR3-209ENST00000507588 FRAS1Q86XX4 4008 aa13.66□□□□□ -0.22
FGFR3-209ENST00000507588 PITX3O75364 302 aa13.66□□□□□ -0.22
FGFR3-209ENST00000507588 SPP1P10451 314 aa13.66□□□□□ -0.22
FGFR3-209ENST00000507588 AP2S1P53680 142 aaPredicted RBP13.66□□□□□ -0.22
FGFR3-209ENST00000507588 CCDC190Q86UF4 302 aa13.66□□□□□ -0.22
FGFR3-209ENST00000507588 SLC25A21Q9BQT8 299 aaPredicted RBP13.66□□□□□ -0.22
FGFR3-209ENST00000507588 KLK5Q9Y337 293 aaPredicted RBP13.66□□□□□ -0.22
FGFR3-209ENST00000507588 VPS13DQ5THJ4 4388 aa13.65□□□□□ -0.22
FGFR3-209ENST00000507588 BUB3O43684 328 aa13.65□□□□□ -0.22
FGFR3-209ENST00000507588 RD3LP0DJH9 198 aa13.65□□□□□ -0.22
FGFR3-209ENST00000507588 SLC25A6P12236 298 aa13.65□□□□□ -0.22
FGFR3-209ENST00000507588 S100A5P33763 92 aa13.65□□□□□ -0.22
FGFR3-209ENST00000507588 MORN3Q6PF18 240 aaPredicted RBP13.65□□□□□ -0.22
FGFR3-209ENST00000507588 TMED4Q7Z7H5 227 aa13.65□□□□□ -0.22
FGFR3-209ENST00000507588 OR1S1Q8NH92 325 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms