RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 ABHD1Q96SE0 405 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 NRN1Q9NPD7 142 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 X6R8D5 127 aa15.23■□□□□ 0.03
SQSTM1-210ENST00000506042 PIGBOS1A0A0B4J2F0 54 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 TEX13DA0A0J9YY54 714 aaPredicted RBP15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 SMIM9A6NGZ8 99 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 CEBPZOSA8MTT3 80 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 IFNA10P01566 189 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 FABP1P07148 127 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 SPART-AS1P0CW21 52 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 ID1P41134 155 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 DHODHQ02127 395 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 C16orf54Q6UWD8 224 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 LHFPL1Q86WI0 220 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 UBE2DNLQ8IWF7 75 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 FAM210BQ96KR6 192 aa15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 FNDC4Q9H6D8 234 aaPredicted RBP15.22■□□□□ 0.03
SQSTM1-210ENST00000506042 HPGDSO60760 199 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 IL4P05112 153 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 P0C879 139 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 ELK1P19419 428 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 RND2P52198 227 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 BSXQ3C1V8 233 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 C2orf83Q53S99 150 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 SIGLEC15Q6ZMC9 328 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 RBPMSQ93062 196 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 CLEC5AQ9NY25 188 aa15.21■□□□□ 0.03
SQSTM1-210ENST00000506042 ELOA3CA0A087WX78 387 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 RAB3DO95716 219 aa15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 IGKV1-17P01599 117 aa15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 CD3DP04234 171 aa15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 GIG44P09565 113 aaPredicted RBP15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 RD3LP0DJH9 198 aa15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 MEF2DQ14814 521 aa15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 SAMD13Q5VXD3 122 aa15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 TMEM222Q9H0R3 208 aa15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 MTFP1Q9UDX5 166 aa15.2■□□□□ 0.02
SQSTM1-210ENST00000506042 FAM90A26D6RGX4 464 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 IGLC1P0CG04 106 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 MED14OSP0DP75 135 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 MRPS10P82664 201 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 SSBP1Q04837 148 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 SP6Q3SY56 376 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 RNASE12Q5GAN4 147 aaKnown RBP15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 TMEM229BQ8NBD8 167 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 GLMPQ8WWB7 406 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 NEU1Q99519 415 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 XCL2Q9UBD3 114 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 KLK11Q9UBX7 282 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 U3KQE9 123 aa15.19■□□□□ 0.02
SQSTM1-210ENST00000506042 DISC1C4P0D8 188 aa15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 CDS2O95674 445 aa15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 NKX2-1P43699 371 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 SURF2Q15527 256 aaPredicted RBP15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 SPATA31B1PQ5VZV4 182 aa15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 PRSS54Q6PEW0 395 aa15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 CSNK1G2-AS1Q8NCQ2 148 aa15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 OR13C8Q8NGS7 320 aa15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 EXTL2Q9UBQ6 330 aa15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 KCNIP3Q9Y2W7 256 aa15.18■□□□□ 0.02
SQSTM1-210ENST00000506042 PRSS29PA6NIE9 313 aa15.17■□□□□ 0.02
SQSTM1-210ENST00000506042 TOMM40O96008 361 aa15.17■□□□□ 0.02
SQSTM1-210ENST00000506042 VBP1P61758 197 aa15.17■□□□□ 0.02
SQSTM1-210ENST00000506042 NCS1P62166 190 aa15.17■□□□□ 0.02
SQSTM1-210ENST00000506042 AARDQ4LEZ3 155 aa15.17■□□□□ 0.02
SQSTM1-210ENST00000506042 STEAP1BQ6NZ63 245 aa15.17■□□□□ 0.02
SQSTM1-210ENST00000506042 COQ8AQ8NI60 647 aa15.17■□□□□ 0.02
SQSTM1-210ENST00000506042 FUNDC2Q9BWH2 189 aa15.17■□□□□ 0.02
SQSTM1-210ENST00000506042 GABARAPH6UMI1 98 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 GABARAPO95166 117 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 OR5AC1P0C628 307 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 HLA-DRB4P13762 266 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 S100A7P31151 101 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 ATP5IP56385 69 aaPredicted RBP15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 C12orf74Q32Q52 190 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 OR51G1Q8NGK1 321 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 OR52I2Q8NH67 350 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 MARCH1Q8TCQ1 289 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 ACY3Q96HD9 319 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 SCGB3A2Q96PL1 93 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 MRPL36Q9P0J6 103 aaKnown RBP15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 CACNG5Q9UF02 275 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 GOLT1BQ9Y3E0 138 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 RFNGQ9Y644 331 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 HLA-DRB4X5D2U9 266 aa15.16■□□□□ 0.02
SQSTM1-210ENST00000506042 H3BMM0 161 aa15.15■□□□□ 0.02
SQSTM1-210ENST00000506042 ZNF182P17025 639 aaPredicted RBP15.15■□□□□ 0.02
SQSTM1-210ENST00000506042 MLANAQ16655 118 aa15.15■□□□□ 0.02
SQSTM1-210ENST00000506042 LGALS9BQ3B8N2 356 aa15.15■□□□□ 0.02
SQSTM1-210ENST00000506042 GPR107Q5VW38 600 aa15.15■□□□□ 0.02
SQSTM1-210ENST00000506042 OR8G2PQ6IF36 304 aa15.15■□□□□ 0.02
SQSTM1-210ENST00000506042 NAA60Q9H7X0 242 aa15.15■□□□□ 0.02
SQSTM1-210ENST00000506042 U3KQ87 197 aa15.15■□□□□ 0.02
SQSTM1-210ENST00000506042 BUB3O43684 328 aa15.14■□□□□ 0.01
SQSTM1-210ENST00000506042 SULT1A3P0DMM9 295 aa15.14■□□□□ 0.01
SQSTM1-210ENST00000506042 SULT1A4P0DMN0 295 aa15.14■□□□□ 0.01
SQSTM1-210ENST00000506042 TMEM268Q5VZI3 342 aa15.14■□□□□ 0.01
SQSTM1-210ENST00000506042 NPIPB3Q92617 1050 aa15.14■□□□□ 0.01
SQSTM1-210ENST00000506042 RABL2AQ9UBK7 228 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms