RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 ENY2Q9NPA8 101 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 TP73-AS1Q9UF72 201 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 FAM32AQ9Y421 112 aaKnown RBP0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 TECTAO75443 2155 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 TOPBP1Q92547 1522 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 CACNA1BQ00975 2339 aa0.88□□□□□ -2.27
TOPBP1-204ENST00000505804 SYNMO15061 1565 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 PCLOQ9Y6V0 5065 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 TNRC6BQ9UPQ9 1833 aaKnown RBP0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 EXPH5Q8NEV8 1989 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 TMEM238C9JI98 176 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 GEMIN2O14893 280 aaKnown RBP0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 ZNF682O95780 498 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 SHBGP04278 402 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 SERPINE1P05121 402 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 RBP1P09455 135 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 SMIM10L2AP0DMW4 78 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 SMIM10L2BP0DMW5 78 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 G0S2P27469 103 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 GNG10P50151 68 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 HBA1P69905 142 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 RPL19P84098 196 aaKnown RBP0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 KRR1Q13601 381 aaKnown RBP0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 RPL22L1Q6P5R6 122 aaKnown RBP0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 LCN15Q6UWW0 184 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 LYG2Q86SG7 212 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 C12orf45Q8N5I9 185 aaPredicted RBP0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 OR13C4Q8NGS5 318 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 RASSF5Q8WWW0 418 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 AQP3Q92482 292 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 TMEM106AQ96A25 262 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 TOMM6Q96B49 74 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 PRRT1Q99946 306 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 C20orf27Q9GZN8 174 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 RNASE7Q9H1E1 156 aaKnown RBP0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 OPTCQ9UBM4 332 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 MIA2Q96PC5 1412 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 RP1P56715 2156 aa0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 USP9XQ93008 2570 aaPredicted RBP0.87□□□□□ -2.27
TOPBP1-204ENST00000505804 OBSL1O75147 1896 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 SETXQ7Z333 2677 aaKnown RBP0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 ROCK1Q13464 1354 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 PTPN13Q12923 2485 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 ADGBQ8N7X0 1667 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 TRAV9-1A0A075B6T8 112 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 hCG_1818297A0A087WSY0 165 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 A8MT66 165 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 ATG12O94817 140 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 IFNA10P01566 189 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 C8GP07360 202 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 HSPE1P61604 102 aaKnown RBP0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 VBP1P61758 197 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 POU6F1Q14863 301 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 DEFB115Q30KQ5 88 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 GOLT1AQ6ZVE7 132 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 TMED4Q7Z7H5 227 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 STX12Q86Y82 276 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 C12orf29Q8N999 325 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 OR11H6Q8NGC7 330 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 GNPDA2Q8TDQ7 276 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 H1FXQ92522 213 aaKnown RBP0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 CCDC90BQ9GZT6 254 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 TRABDQ9H4I3 376 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 PARVBQ9HBI1 364 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 UQCC1Q9NVA1 299 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 OR5AC2Q9NZP5 309 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 CYSLTR1Q9Y271 337 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 SNURFQ9Y675 71 aa0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 ZCCHC11Q5TAX3 1644 aaKnown RBP0.86□□□□□ -2.27
TOPBP1-204ENST00000505804 IGKV1D-42A0A075B6H8 117 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 TRAV4A0A0B4J268 109 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 BUB1B-PAK6H3BSN5 160 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 HMGB3O15347 200 aaKnown RBP0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 OR2J2O76002 312 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 SBF1O95248 1867 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 C1QBP02746 253 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 PPIBP23284 216 aaKnown RBP0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 FKBP2P26885 142 aaKnown RBP0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 ERP29P30040 261 aaKnown RBP0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 CDC42P60953 191 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 B2MP61769 119 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 SPANXN3Q5MJ09 141 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 ALPK2Q86TB3 2170 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 OR4C6Q8NH72 309 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 NEK7Q8TDX7 302 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 GPR146Q96CH1 333 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 SCGB3A1Q96QR1 104 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 HOPXQ9BPY8 73 aaPredicted RBP0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 SELENOSQ9BQE4 189 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 RNF122Q9H9V4 155 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 GID8Q9NWU2 228 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 CKLFQ9UBR5 152 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 ATPIF1Q9UII2 106 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 PYCARDQ9ULZ3 195 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 COL6A3P12111 3177 aa0.85□□□□□ -2.27
TOPBP1-204ENST00000505804 MED1Q15648 1581 aaPredicted RBP0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 FMN1Q68DA7 1419 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 N4BP2Q86UW6 1770 aaPredicted RBP0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
TOPBP1-204ENST00000505804 FUOMA2VDF0 154 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms