RNA–Protein interactions for RNA: ENST00000505672.5

CCND3-208, Transcript of cyclin D3, humanhuman

TSL 2

Gene CCND3, Length 932 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-208ENST00000505672 DFFBO76075 338 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 LY6G6CO95867 125 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 IGKV1-17P01599 117 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 ANXA3P12429 323 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 NPPCP23582 126 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 NPY1RP25929 384 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 S100A5P33763 92 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 RND2P52198 227 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 AP3S2P59780 193 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 RPL11P62913 178 aaKnown RBP13.26□□□□□ -0.29
CCND3-208ENST00000505672 PMS2P11Q13670 270 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 ZNF79Q15937 498 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 NMSQ5H8A3 153 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 LYZL2Q7Z4W2 148 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 TMED4Q7Z7H5 227 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 TOMM5Q8N4H5 51 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 RNASEH2CQ8TDP1 164 aaKnown RBP13.26□□□□□ -0.29
CCND3-208ENST00000505672 TMEM170AQ8WVE7 144 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 METTL26Q96S19 204 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 MS4A6AQ9H2W1 248 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 TMEM231Q9H6L2 316 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 CACFD1Q9UGQ2 172 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 SHPKQ9UHJ6 478 aa13.26□□□□□ -0.29
CCND3-208ENST00000505672 DNASE2O00115 360 aaPredicted RBP13.25□□□□□ -0.29
CCND3-208ENST00000505672 SLC25A4P12235 298 aa13.25□□□□□ -0.29
CCND3-208ENST00000505672 CCR6P51684 374 aa13.25□□□□□ -0.29
CCND3-208ENST00000505672 SRPXP78539 464 aa13.25□□□□□ -0.29
CCND3-208ENST00000505672 TNFRSF9Q07011 255 aa13.25□□□□□ -0.29
CCND3-208ENST00000505672 SMCO1Q147U7 214 aa13.25□□□□□ -0.29
CCND3-208ENST00000505672 PRSS54Q6PEW0 395 aa13.25□□□□□ -0.29
CCND3-208ENST00000505672 LGI3Q8N145 548 aa13.25□□□□□ -0.29
CCND3-208ENST00000505672 RBM38Q9H0Z9 239 aaKnown RBP13.25□□□□□ -0.29
CCND3-208ENST00000505672 A0A1W2PS18 150 aa13.24□□□□□ -0.29
CCND3-208ENST00000505672 IGLC1P0CG04 106 aa13.24□□□□□ -0.29
CCND3-208ENST00000505672 OR1S2Q8NGQ3 325 aa13.24□□□□□ -0.29
CCND3-208ENST00000505672 RNF183Q96D59 192 aa13.24□□□□□ -0.29
CCND3-208ENST00000505672 HSPB7Q9UBY9 170 aa13.24□□□□□ -0.29
CCND3-208ENST00000505672 CXorf65A6NEN9 183 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 IFNA10P01566 189 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 CRYBB3P26998 211 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 OR10J1P30954 320 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 P2RY1P47900 373 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 LYG2Q86SG7 212 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 NOXA1Q86UR1 476 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 NARS2Q96I59 477 aaKnown RBP13.23□□□□□ -0.29
CCND3-208ENST00000505672 RBKSQ9H477 322 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 RABAC1Q9UI14 185 aa13.23□□□□□ -0.29
CCND3-208ENST00000505672 TRAV2A0A0B4J234 112 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 DEFB131AP59861 70 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 TMEM128Q5BJH2 165 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 ETFRF1Q6IPR1 90 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 CEMP1Q6PRD7 247 aaPredicted RBP13.22□□□□□ -0.29
CCND3-208ENST00000505672 CCDC190Q86UF4 302 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 FAM24BQ8N5W8 94 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 OR1S1Q8NH92 325 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 DTD1Q8TEA8 209 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 NPIPB3Q92617 1050 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
CCND3-208ENST00000505672 VAMP1P23763 118 aa13.21□□□□□ -0.29
CCND3-208ENST00000505672 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
CCND3-208ENST00000505672 RBMS2Q15434 407 aaKnown RBP13.21□□□□□ -0.29
CCND3-208ENST00000505672 LEMD1Q68G75 181 aa13.21□□□□□ -0.29
CCND3-208ENST00000505672 STXBP6Q8NFX7 210 aa13.21□□□□□ -0.29
CCND3-208ENST00000505672 Q8WTZ3 238 aa13.21□□□□□ -0.29
CCND3-208ENST00000505672 ACY3Q96HD9 319 aa13.21□□□□□ -0.29
CCND3-208ENST00000505672 U3KQ87 197 aa13.21□□□□□ -0.29
CCND3-208ENST00000505672 HECTD4Q9Y4D8 3996 aa13.21□□□□□ -0.29
CCND3-208ENST00000505672 PIGBOS1A0A0B4J2F0 54 aa13.2□□□□□ -0.3
CCND3-208ENST00000505672 DUXBA0A1W2PPF3 345 aa13.2□□□□□ -0.3
CCND3-208ENST00000505672 NUPR2A6NF83 97 aa13.2□□□□□ -0.3
CCND3-208ENST00000505672 MPTX1A8MV57 137 aa13.2□□□□□ -0.3
CCND3-208ENST00000505672 SPANXN2Q5MJ10 180 aa13.2□□□□□ -0.3
CCND3-208ENST00000505672 RPP25LQ8N5L8 163 aaKnown RBP13.2□□□□□ -0.3
CCND3-208ENST00000505672 DEDD2Q8WXF8 326 aa13.2□□□□□ -0.3
CCND3-208ENST00000505672 GRAMD2BQ96HH9 432 aa13.2□□□□□ -0.3
CCND3-208ENST00000505672 SLC25A21Q9BQT8 299 aaPredicted RBP13.2□□□□□ -0.3
CCND3-208ENST00000505672 K7EQG2 157 aa13.19□□□□□ -0.3
CCND3-208ENST00000505672 ZNF701M0R085 212 aaPredicted RBP13.19□□□□□ -0.3
CCND3-208ENST00000505672 IFNA4P05014 189 aa13.19□□□□□ -0.3
CCND3-208ENST00000505672 IL4P05112 153 aa13.19□□□□□ -0.3
CCND3-208ENST00000505672 HNRNPCP07910 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCND3-208ENST00000505672 U3KQE9 123 aa13.19□□□□□ -0.3
CCND3-208ENST00000505672 TOMM40O96008 361 aa13.18□□□□□ -0.3
CCND3-208ENST00000505672 ATF4P18848 351 aaPredicted RBP13.18□□□□□ -0.3
CCND3-208ENST00000505672 PPP1R1AQ13522 171 aa13.18□□□□□ -0.3
CCND3-208ENST00000505672 USF2Q15853 346 aaPredicted RBP13.18□□□□□ -0.3
CCND3-208ENST00000505672 SRRQ9GZT4 340 aa13.18□□□□□ -0.3
CCND3-208ENST00000505672 DNAH6Q9C0G6 4158 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 PITX3O75364 302 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 SFT2D2O95562 160 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 CA1P00915 261 aaPredicted RBP13.17□□□□□ -0.3
CCND3-208ENST00000505672 ZNF688P0C7X2 276 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 EIF2B2P49770 351 aaKnown RBP13.17□□□□□ -0.3
CCND3-208ENST00000505672 C16orf54Q6UWD8 224 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 STHQ8IWL8 128 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 CENPSQ8N2Z9 138 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 LRTM2Q8N967 370 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 GATAD1Q8WUU5 269 aa13.17□□□□□ -0.3
CCND3-208ENST00000505672 GLMPQ8WWB7 406 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms