RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 NPIPB3Q92617 1050 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 OR8B2Q96RD0 313 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 CSMD1Q96PZ7 3565 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 RP1L1Q8IWN7 2480 aaPredicted RBP9.6□□□□□ -0.87
UBE3D-206ENST00000505226 GRAMD2BQ96HH9 432 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 ZNF714Q96N38 554 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 PAXXQ9BUH6 204 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 MRPL32Q9BYC8 188 aaKnown RBP9.6□□□□□ -0.87
UBE3D-206ENST00000505226 CLEC5AQ9NY25 188 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 RNF7Q9UBF6 113 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 IGLV3-9A0A075B6K5 115 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 H0YJW9 148 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 IGHV1-46P01743 117 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 GLRXP35754 106 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 MYCNOSP40205 109 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 KLF5Q13887 457 aaPredicted RBP9.59□□□□□ -0.87
UBE3D-206ENST00000505226 ZNF788Q6ZQV5 615 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 HARBI1Q96MB7 349 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 DYSFO75923 2080 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 ROS1P08922 2347 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 M0R2Z0 102 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 DLL1O00548 723 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 HSBP1O75506 76 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 GATA4P43694 442 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 PLA2G2CQ5R387 149 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 FAM120AOSQ5T036 256 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 RNASEKQ6P5S7 137 aaKnown RBP9.59□□□□□ -0.87
UBE3D-206ENST00000505226 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 FAM169BQ8N8A8 192 aa9.59□□□□□ -0.87
UBE3D-206ENST00000505226 COX7A2P2O60397 106 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 C10orf113Q5VZT2 155 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 LINC00173Q6ZV60 143 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 TCF24Q7RTU0 167 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 CACNG8Q8WXS5 425 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 SARAFQ96BY9 339 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 ATMQ13315 3056 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 IGHV2-26A0A0B4J1V2 119 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 A0A1B0GXF2 115 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 CCL3L1P16619 93 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 RASL11AQ6T310 242 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 RNASE8Q8TDE3 154 aaKnown RBP9.58□□□□□ -0.88
UBE3D-206ENST00000505226 RITA1Q96K30 269 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 BSNQ9UPA5 3926 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 TRAV9-2A0A087WT02 112 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 OR2J3O76001 311 aa9.58□□□□□ -0.88
UBE3D-206ENST00000505226 TNFAIP6P98066 277 aaPredicted RBP9.58□□□□□ -0.88
UBE3D-206ENST00000505226 Q71RC1 249 aaPredicted RBP9.58□□□□□ -0.88
UBE3D-206ENST00000505226 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
UBE3D-206ENST00000505226 SP9P0CG40 484 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 ZCCHC24Q8N2G6 241 aaKnown RBP9.57□□□□□ -0.88
UBE3D-206ENST00000505226 KLHDC1Q8N7A1 406 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 OR2D3Q8NGH3 330 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 ORAOV1Q8WV07 137 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 GTSF1Q8WW33 167 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 ST6GALNAC6Q969X2 333 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 TPSG1Q9NRR2 321 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 FOXA3P55318 350 aaPredicted RBP9.57□□□□□ -0.88
UBE3D-206ENST00000505226 ATP5IP56385 69 aaPredicted RBP9.57□□□□□ -0.88
UBE3D-206ENST00000505226 UBE2G1P62253 170 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 IGFL2Q6UWQ7 119 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 LINC00305Q7Z4B0 112 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 BLNKQ8WV28 456 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 CBY1Q9Y3M2 126 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 TCRBV4S1A1TA0A5B7 111 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 C22orf46C9J442 243 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 H3BTX0 84 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 SAP30LQ9HAJ7 183 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 RAB9BQ9NP90 201 aa9.57□□□□□ -0.88
UBE3D-206ENST00000505226 ABCA1O95477 2261 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 C20orf202A1L168 122 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 MOSP00540 346 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 ERHP84090 104 aaKnown RBP9.56□□□□□ -0.88
UBE3D-206ENST00000505226 OSR1Q8TAX0 266 aaPredicted RBP9.56□□□□□ -0.88
UBE3D-206ENST00000505226 IGLV2-23P01705 113 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 MRGPRG-AS1Q2M3A8 158 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 TIMM23BQ5SRD1 257 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 SSX8Q7RTT4 187 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 MLST8Q9BVC4 326 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 ZNF430Q9H8G1 570 aaPredicted RBP9.56□□□□□ -0.88
UBE3D-206ENST00000505226 EPDR1Q9UM22 224 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 RPH3ALQ9UNE2 315 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 COLQQ9Y215 455 aaPredicted RBP9.56□□□□□ -0.88
UBE3D-206ENST00000505226 COX11Q9Y6N1 276 aa9.56□□□□□ -0.88
UBE3D-206ENST00000505226 IGLC7A0M8Q6 106 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 TM4SF5O14894 197 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 PCP4P48539 62 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 CCL8P80075 99 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 TRAV17A0A0B4J275 112 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 PGPA6NDG6 321 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 MBD3L4A6NDZ8 208 aaPredicted RBP9.55□□□□□ -0.88
UBE3D-206ENST00000505226 MBD3L3A6NE82 208 aaPredicted RBP9.55□□□□□ -0.88
UBE3D-206ENST00000505226 MBD3L5A6NJ08 208 aaPredicted RBP9.55□□□□□ -0.88
UBE3D-206ENST00000505226 TOMM40O96008 361 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 ORM2P19652 201 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 TMEM177Q53S58 311 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 ERASQ7Z444 233 aa9.55□□□□□ -0.88
UBE3D-206ENST00000505226 MBD3L2Q8NHZ7 208 aaPredicted RBP9.55□□□□□ -0.88
UBE3D-206ENST00000505226 FLYWCH2Q96CP2 140 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms