RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 K7EQG2 157 aa16.56■□□□□ 0.24
CDC42SE2-207ENST00000504701 AKR1C4P17516 323 aa16.56■□□□□ 0.24
CDC42SE2-207ENST00000504701 CMC4P56277 68 aaPredicted RBP16.56■□□□□ 0.24
CDC42SE2-207ENST00000504701 LYZL2Q7Z4W2 148 aa16.56■□□□□ 0.24
CDC42SE2-207ENST00000504701 OR11H2Q8NH07 326 aa16.56■□□□□ 0.24
CDC42SE2-207ENST00000504701 KNCNA6PVL3 124 aa16.55■□□□□ 0.24
CDC42SE2-207ENST00000504701 GIG44P09565 113 aaPredicted RBP16.55■□□□□ 0.24
CDC42SE2-207ENST00000504701 ZNF688P0C7X2 276 aa16.55■□□□□ 0.24
CDC42SE2-207ENST00000504701 OR10J1P30954 320 aa16.55■□□□□ 0.24
CDC42SE2-207ENST00000504701 NANOS2P60321 138 aaKnown RBP16.55■□□□□ 0.24
CDC42SE2-207ENST00000504701 BCL7BQ9BQE9 202 aa16.55■□□□□ 0.24
CDC42SE2-207ENST00000504701 U3KQE9 123 aa16.55■□□□□ 0.24
CDC42SE2-207ENST00000504701 KMT2AQ03164 3969 aa16.55■□□□□ 0.24
CDC42SE2-207ENST00000504701 RPS10-NUDT3A0A1W2PQS6 291 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 FABP12A6NFH5 140 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 CD5P06127 495 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 SULT1A3P0DMM9 295 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 SULT1A4P0DMN0 295 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 NPY1RP25929 384 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 USF2Q15853 346 aaPredicted RBP16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 NMSQ5H8A3 153 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 OR1S2Q8NGQ3 325 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 MCFD2Q8NI22 146 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 DCANP1Q8TF63 244 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 NPIPB3Q92617 1050 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 ACY3Q96HD9 319 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 TMEM231Q9H6L2 316 aa16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 RSL24D1Q9UHA3 163 aaKnown RBP16.54■□□□□ 0.24
CDC42SE2-207ENST00000504701 TRAV2A0A0B4J234 112 aa16.53■□□□□ 0.24
CDC42SE2-207ENST00000504701 A0A1W2PS18 150 aa16.53■□□□□ 0.24
CDC42SE2-207ENST00000504701 RNASEH2CQ8TDP1 164 aaKnown RBP16.53■□□□□ 0.24
CDC42SE2-207ENST00000504701 GATAD1Q8WUU5 269 aa16.53■□□□□ 0.24
CDC42SE2-207ENST00000504701 PHLDA1Q8WV24 401 aaPredicted RBP16.53■□□□□ 0.24
CDC42SE2-207ENST00000504701 RBKSQ9H477 322 aa16.53■□□□□ 0.24
CDC42SE2-207ENST00000504701 SCP2D1Q9UJQ7 156 aa16.53■□□□□ 0.24
CDC42SE2-207ENST00000504701 TRAV30A0A087WSZ9 112 aa16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 ATF4P18848 351 aaPredicted RBP16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 C4BPBP20851 252 aa16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 KLF9Q13886 244 aaPredicted RBP16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 STHQ8IWL8 128 aa16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 GLMPQ8WWB7 406 aa16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 IL22RA2Q969J5 263 aa16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 TRIM63Q969Q1 353 aa16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 RABL2AQ9UBK7 228 aaPredicted RBP16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 RABL2BQ9UNT1 228 aa16.52■□□□□ 0.24
CDC42SE2-207ENST00000504701 SLC25A4P12235 298 aa16.51■□□□□ 0.23
CDC42SE2-207ENST00000504701 C16orf54Q6UWD8 224 aa16.51■□□□□ 0.23
CDC42SE2-207ENST00000504701 GSG1LQ6UXU4 331 aa16.51■□□□□ 0.23
CDC42SE2-207ENST00000504701 TRPT1Q86TN4 253 aaKnown RBP16.51■□□□□ 0.23
CDC42SE2-207ENST00000504701 HSPB7Q9UBY9 170 aa16.51■□□□□ 0.23
CDC42SE2-207ENST00000504701 KCNIP3Q9Y2W7 256 aa16.51■□□□□ 0.23
CDC42SE2-207ENST00000504701 V9GYH0 126 aa16.51■□□□□ 0.23
CDC42SE2-207ENST00000504701 NOL3O60936 208 aaKnown RBP16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 IFNA10P01566 189 aa16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 IL4P05112 153 aa16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 HNRNPCP07910 306 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 YPEL3P61236 119 aaPredicted RBP16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 SMCO1Q147U7 214 aa16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 DTD1Q8TEA8 209 aa16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 Q8WTZ3 238 aa16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 FBXL17Q9UF56 701 aa16.5■□□□□ 0.23
CDC42SE2-207ENST00000504701 A0A0B4J2A0 478 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 CCR6P51684 374 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 DHRS2Q13268 280 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 ZNF79Q15937 498 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 TMED4Q7Z7H5 227 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 TMEM217Q8N7C4 229 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 GRAMD2BQ96HH9 432 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 C11orf68Q9H3H3 251 aaKnown RBP16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 CLEC5AQ9NY25 188 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 SHPKQ9UHJ6 478 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 FRAS1Q86XX4 4008 aa16.49■□□□□ 0.23
CDC42SE2-207ENST00000504701 SCGB2A1O75556 95 aa16.48■□□□□ 0.23
CDC42SE2-207ENST00000504701 PSG1P11464 419 aa16.48■□□□□ 0.23
CDC42SE2-207ENST00000504701 PYDC2Q56P42 97 aa16.48■□□□□ 0.23
CDC42SE2-207ENST00000504701 ACTL10Q5JWF8 245 aa16.48■□□□□ 0.23
CDC42SE2-207ENST00000504701 LGI3Q8N145 548 aa16.48■□□□□ 0.23
CDC42SE2-207ENST00000504701 NARS2Q96I59 477 aaKnown RBP16.48■□□□□ 0.23
CDC42SE2-207ENST00000504701 TOMM40O96008 361 aa16.47■□□□□ 0.23
CDC42SE2-207ENST00000504701 PSMG4Q5JS54 123 aa16.47■□□□□ 0.23
CDC42SE2-207ENST00000504701 RPP25LQ8N5L8 163 aaKnown RBP16.47■□□□□ 0.23
CDC42SE2-207ENST00000504701 Q8NAQ8 132 aa16.47■□□□□ 0.23
CDC42SE2-207ENST00000504701 OR51G1Q8NGK1 321 aa16.47■□□□□ 0.23
CDC42SE2-207ENST00000504701 C11orf45Q8TAV5 145 aa16.47■□□□□ 0.23
CDC42SE2-207ENST00000504701 SCGB3A2Q96PL1 93 aa16.47■□□□□ 0.23
CDC42SE2-207ENST00000504701 KLK5Q9Y337 293 aaPredicted RBP16.47■□□□□ 0.23
CDC42SE2-207ENST00000504701 IGKV1D-37A0A075B6S9 117 aa16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 DEDDO75618 318 aa16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 RBMY1A1P0DJD3 496 aaKnown RBP16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 RBMY1CP0DJD4 496 aa16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 RD3LP0DJH9 198 aa16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 ZNF90Q03938 601 aa16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 RBMY1FQ15415 496 aaKnown RBP16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 ETFRF1Q6IPR1 90 aa16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 OR1S1Q8NH92 325 aa16.46■□□□□ 0.23
CDC42SE2-207ENST00000504701 IAPPP10997 89 aa16.45■□□□□ 0.22
CDC42SE2-207ENST00000504701 DEFB1P60022 68 aa16.45■□□□□ 0.22
CDC42SE2-207ENST00000504701 U3KQ87 197 aa16.45■□□□□ 0.22
CDC42SE2-207ENST00000504701 IGHV4-28A0A0C4DH34 117 aa16.44■□□□□ 0.22
CDC42SE2-207ENST00000504701 HELTA6NFD8 242 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms