RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 RNASEH2CQ8TDP1 164 aaKnown RBP10.6□□□□□ -0.71
HOXC9-202ENST00000504557 NPIPB3Q92617 1050 aa10.6□□□□□ -0.71
HOXC9-202ENST00000504557 METTL26Q96S19 204 aa10.6□□□□□ -0.71
HOXC9-202ENST00000504557 SDHCQ99643 169 aaPredicted RBP10.6□□□□□ -0.71
HOXC9-202ENST00000504557 MAGT1Q9H0U3 335 aa10.6□□□□□ -0.71
HOXC9-202ENST00000504557 RABAC1Q9UI14 185 aa10.6□□□□□ -0.71
HOXC9-202ENST00000504557 AGRNO00468 2067 aa10.6□□□□□ -0.71
HOXC9-202ENST00000504557 TRAV30A0A087WSZ9 112 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 IGKV1-17P01599 117 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 SLC25A4P12235 298 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 PAFAH1B2P68402 229 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 CASC10Q5T4H9 136 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 ETFRF1Q6IPR1 90 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 NOXA1Q86UR1 476 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 EDA2RQ9HAV5 297 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 CACFD1Q9UGQ2 172 aa10.59□□□□□ -0.71
HOXC9-202ENST00000504557 DUXBA0A1W2PPF3 345 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 NAP1L6A6NFF2 107 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 CENPXA8MT69 81 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 IGLC1P0CG04 106 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 IL7P13232 177 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 STXBP6Q8NFX7 210 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 OR1S2Q8NGQ3 325 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 Q8WTZ3 238 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 DEDD2Q8WXF8 326 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 NARS2Q96I59 477 aaKnown RBP10.58□□□□□ -0.72
HOXC9-202ENST00000504557 MS4A6AQ9H2W1 248 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 VSIRQ9H7M9 311 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 NDUFA13Q9P0J0 144 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 U3KQ87 197 aa10.58□□□□□ -0.72
HOXC9-202ENST00000504557 PIGBOS1A0A0B4J2F0 54 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 WRBO00258 174 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 ADAP1O75689 374 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 NDUFB6O95139 128 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 IL4P05112 153 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 ANXA7P20073 488 aaKnown RBP10.57□□□□□ -0.72
HOXC9-202ENST00000504557 P2RY1P47900 373 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 APOC4P55056 127 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 C4orf46Q504U0 113 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 GGNBP1Q5YKI7 109 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 FAM90A2PQ658T7 463 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 TMEM231Q9H6L2 316 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 MAP6D1Q9H9H5 199 aa10.57□□□□□ -0.72
HOXC9-202ENST00000504557 A0A1W2PS18 150 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 C9orf170A2RU37 121 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 FAM24BQ8N5W8 94 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 LRTM2Q8N967 370 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 SLC35E1Q96K37 410 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 OVOL2Q9BRP0 275 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 TMED3Q9Y3Q3 217 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 DNAH7Q8WXX0 4024 aa10.56□□□□□ -0.72
HOXC9-202ENST00000504557 ZFP92A6NM28 416 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 MPTX1A8MV57 137 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 H3BP45 60 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 PITX3O75364 302 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 MED6O75586 246 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 HNRNPCP07910 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
HOXC9-202ENST00000504557 OR4E1P0C645 316 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 RD3LP0DJH9 198 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 CRYBB3P26998 211 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 BTCP35070 178 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 DEFB131AP59861 70 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 UBE2MP61081 183 aaKnown RBP10.55□□□□□ -0.72
HOXC9-202ENST00000504557 USF2Q15853 346 aaPredicted RBP10.55□□□□□ -0.72
HOXC9-202ENST00000504557 STPG3Q8N7X2 389 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 OR51G1Q8NGK1 321 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 COQ8AQ8NI60 647 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 GRAMD2BQ96HH9 432 aa10.55□□□□□ -0.72
HOXC9-202ENST00000504557 SYNGR2O43760 224 aa10.54□□□□□ -0.72
HOXC9-202ENST00000504557 SCGB1D2O95969 90 aa10.54□□□□□ -0.72
HOXC9-202ENST00000504557 YPEL3P61236 119 aaPredicted RBP10.54□□□□□ -0.72
HOXC9-202ENST00000504557 RAB11AP62491 216 aa10.54□□□□□ -0.72
HOXC9-202ENST00000504557 DHRS2Q13268 280 aa10.54□□□□□ -0.72
HOXC9-202ENST00000504557 OR2F1Q13607 317 aa10.54□□□□□ -0.72
HOXC9-202ENST00000504557 GAMTQ14353 236 aa10.54□□□□□ -0.72
HOXC9-202ENST00000504557 SPANXN5Q5MJ07 72 aa10.54□□□□□ -0.72
HOXC9-202ENST00000504557 LYG2Q86SG7 212 aa10.54□□□□□ -0.72
HOXC9-202ENST00000504557 LYRM1O43325 122 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 SPRY2O43597 315 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 TOMM40O96008 361 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 IFNA21P01568 189 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 CD5P06127 495 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 PSG1P11464 419 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 SLC25A6P12236 298 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
HOXC9-202ENST00000504557 ZNF90Q03938 601 aa10.53□□□□□ -0.72
HOXC9-202ENST00000504557 C7orf50Q9BRJ6 194 aaKnown RBP10.53□□□□□ -0.72
HOXC9-202ENST00000504557 KMT2CQ8NEZ4 4911 aaKnown RBP10.53□□□□□ -0.72
HOXC9-202ENST00000504557 TRAV6A0A075B6T7 132 aa10.52□□□□□ -0.73
HOXC9-202ENST00000504557 FAM90A26D6RGX4 464 aa10.52□□□□□ -0.73
HOXC9-202ENST00000504557 PLA2G10O15496 165 aa10.52□□□□□ -0.73
HOXC9-202ENST00000504557 SSSCA1O60232 199 aa10.52□□□□□ -0.73
HOXC9-202ENST00000504557 LYZP61626 148 aa10.52□□□□□ -0.73
HOXC9-202ENST00000504557 POLR2GP62487 172 aaKnown RBP eCLIP10.52□□□□□ -0.73
HOXC9-202ENST00000504557 RPP30P78346 268 aaKnown RBP10.52□□□□□ -0.73
HOXC9-202ENST00000504557 RNF125Q96EQ8 232 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms