RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PAIP2BQ9ULR5 123 aaKnown RBP9.08□□□□□ -0.96
PDLIM5-208ENST00000504489 A8MWP6 167 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 G3V4G9 280 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 SCGB2A1O75556 95 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 DEDDO75618 318 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 RLN2P04090 185 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 METTL15P1P0C7V9 234 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 CXCL3P19876 107 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 ELLP55199 621 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 S100A10P60903 97 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 RRAS2P62070 204 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 GAMTQ14353 236 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 FCN2Q15485 313 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 IL34Q6ZMJ4 242 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 OR11H7Q8NGC8 314 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 PPP1R1CQ8WVI7 109 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 NPIPB3Q92617 1050 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 WDR89Q96FK6 387 aaPredicted RBP9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 ACY3Q96HD9 319 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 ZNF414Q96IQ9 312 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 SLC35E1Q96K37 410 aa9.07□□□□□ -0.96
PDLIM5-208ENST00000504489 IGHV3-35A0A0C4DH35 117 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 ZNF320A2RRD8 509 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 SCAF4O95104 1147 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 IGKV1-17P01599 117 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 CSN3P07498 182 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 IGLC1P0CG04 106 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 KPRPQ5T749 579 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 OR8G2PQ6IF36 304 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 UNQ9165/PRO28630Q6UXU0 137 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 ZNF600Q6ZNG1 722 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 OR10P1Q8NGE3 313 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 OR1S2Q8NGQ3 325 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 TMEM190Q8WZ59 177 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 LYRM2Q9NU23 88 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 UFC1Q9Y3C8 167 aa9.06□□□□□ -0.96
PDLIM5-208ENST00000504489 TMEM213A2RRL7 107 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 C2orf70A6NJV1 201 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 E5RGE8 158 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 FNDC10F2Z333 226 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 H0YIZ8 118 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 K7EMT4 169 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 SAP30O75446 220 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 CCNKO75909 580 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 MPC2O95563 127 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 OR10J1P30954 320 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 BCAP31P51572 246 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 CAV2P51636 162 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 YPEL3P61236 119 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 DLK1P80370 383 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 EGFEM1PQ0D2K5 195 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 BEAN1Q3B7T3 259 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 TIGITQ495A1 244 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 LRRC37A5PQ49AS3 106 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 ASB13Q8WXK3 278 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 RNF126Q9BV68 326 aa9.05□□□□□ -0.96
PDLIM5-208ENST00000504489 FAM24AA6NFZ4 105 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 IGLV1-51P01701 117 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 PET100P0DJ07 73 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 C8orf88P0DMB2 117 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 FOLR2P14207 255 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 CBLN1P23435 193 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 P2RY1P47900 373 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 ARL16Q0P5N6 197 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 TM4SF20Q53R12 229 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 TOMM20LQ6UXN7 152 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 ADAMTSL5Q6ZMM2 481 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 TMEM144Q7Z5S9 345 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 HAPLN4Q86UW8 402 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 TMEM252Q8N6L7 170 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 THAP8Q8NA92 274 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 MARC2Q969Z3 335 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 GGACTQ9BVM4 153 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 DAZ1Q9NQZ3 744 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 OR5AC2Q9NZP5 309 aa9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 MRPL27Q9P0M9 148 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 ZMAT5Q9UDW3 170 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 PUS1Q9Y606 427 aaKnown RBP eCLIP9.04□□□□□ -0.96
PDLIM5-208ENST00000504489 IGKV1D-37A0A075B6S9 117 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 IGKV1OR2-108A0A075B7D4 117 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 ZFP92A6NM28 416 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 YIF1AO95070 293 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 GIPP09681 153 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 SULT1A1P50225 295 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 Q8WTZ3 238 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 TRGV9Q99603 122 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 C20orf24Q9BUV8 137 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 SLC25A31Q9H0C2 315 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 NPVFQ9HCQ7 196 aa9.03□□□□□ -0.96
PDLIM5-208ENST00000504489 IGSF23A1L1A6 192 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 CST7O76096 145 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 TOMM40O96008 361 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 FABP1P07148 127 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 RD3LP0DJH9 198 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 LYL1P12980 280 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 S100A11P31949 105 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 RAP2BP61225 183 aa9.02□□□□□ -0.97
PDLIM5-208ENST00000504489 AKR1C1Q04828 323 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms