RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 OR2C1O95371 312 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 CD33P20138 364 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 PRSS54Q6PEW0 395 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 SPSB3Q6PJ21 355 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 LINC00482Q8N8I6 264 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 OR10P1Q8NGE3 313 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 OR4X1Q8NH49 305 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 CACNG8Q8WXS5 425 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 DCUN1D4Q92564 292 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 MRPL36Q9P0J6 103 aaKnown RBP7.69□□□□□ -1.18
NUP54-203ENST00000504173 MBD2Q9UBB5 411 aa7.69□□□□□ -1.18
NUP54-203ENST00000504173 hCG_2014768A0A024R1R8 64 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 IGHV3-35A0A0C4DH35 117 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 IGSF23A1L1A6 192 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 PMS2P5A8MQ11 134 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 PRSS46E5RG02 174 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 OVOL1O14753 267 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 CST7O76096 145 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 SCAF4O95104 1147 aaKnown RBP7.68□□□□□ -1.18
NUP54-203ENST00000504173 P2RY1P47900 373 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 SYNJ2BPP57105 145 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 AKR1C1Q04828 323 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 RELQ04864 619 aaPredicted RBP7.68□□□□□ -1.18
NUP54-203ENST00000504173 FGL1Q08830 312 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 GAMTQ14353 236 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 ACOT7LQ6ZUV0 252 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 STX12Q86Y82 276 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 TMEM252Q8N6L7 170 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 TMEM116Q8NCL8 245 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 THAP6Q8TBB0 222 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 NPIPB3Q92617 1050 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 DLX4Q92988 240 aaPredicted RBP7.68□□□□□ -1.18
NUP54-203ENST00000504173 CHRDL1Q9BU40 450 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 RNF126Q9BV68 326 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 SLC25A31Q9H0C2 315 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 AURKAIP1Q9NWT8 199 aaPredicted RBP7.68□□□□□ -1.18
NUP54-203ENST00000504173 STAB2Q8WWQ8 2551 aa7.68□□□□□ -1.18
NUP54-203ENST00000504173 TRAV30A0A087WSZ9 112 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 TRAV14DV4A0A0A6YYC5 116 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 SMCO3A2RU48 225 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 CTSGP08311 255 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 OR10J1P30954 320 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 ADMP35318 185 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 SULT1A1P50225 295 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 DLK1P80370 383 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 SLC38A11Q08AI6 406 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 KLF5Q13887 457 aaPredicted RBP7.67□□□□□ -1.18
NUP54-203ENST00000504173 TIGITQ495A1 244 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 FAM106AQ4KMX7 169 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 HAPLN4Q86UW8 402 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 GPHB5Q86YW7 130 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 TMEM217Q8N7C4 229 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 OR1S2Q8NGQ3 325 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 OR2T35Q8NGX2 323 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 CHAC2Q8WUX2 184 aa7.67□□□□□ -1.18
NUP54-203ENST00000504173 ZNF320A2RRD8 509 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 ZFP92A6NM28 416 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 IGLC1P0CG04 106 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 LYL1P12980 280 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 HBG1P69891 147 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 HBG2P69892 147 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 EWSR1Q01844 656 aaKnown RBP eCLIP7.66□□□□□ -1.18
NUP54-203ENST00000504173 BAXQ07812 192 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 ZNF600Q6ZNG1 722 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 LILRB2Q8N423 598 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 MCRIP2Q9BUT9 160 aaKnown RBP7.66□□□□□ -1.18
NUP54-203ENST00000504173 C20orf24Q9BUV8 137 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 GGACTQ9BVM4 153 aa7.66□□□□□ -1.18
NUP54-203ENST00000504173 SEC14L6B5MCN3 397 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 FNDC10F2Z333 226 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 LGALS9O00182 355 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 NDUFA4O00483 81 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 YIF1AO95070 293 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 IGKV1-17P01599 117 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 RPL12P30050 165 aaKnown RBP7.65□□□□□ -1.18
NUP54-203ENST00000504173 S100A11P31949 105 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 NUP62P37198 522 aaPredicted RBP7.65□□□□□ -1.18
NUP54-203ENST00000504173 Q5BKY6 102 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 UNQ9165/PRO28630Q6UXU0 137 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 THAP8Q8NA92 274 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 WFDC9Q8NEX5 89 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 OR9G4Q8NGQ1 327 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 TMEM190Q8WZ59 177 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 RCC1LQ96I51 464 aaKnown RBP7.65□□□□□ -1.18
NUP54-203ENST00000504173 ELOVL1Q9BW60 279 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 PEMTQ9UBM1 199 aa7.65□□□□□ -1.18
NUP54-203ENST00000504173 LYSTQ99698 3801 aa7.65□□□□□ -1.19
NUP54-203ENST00000504173 IGKV1D-37A0A075B6S9 117 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 IGHV3OR16-8A0A075B7F1 116 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 FXYD6-FXYD2A0A087WZ82 144 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 LCE6AA0A183 80 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 SMLR1H3BR10 107 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 FABP1P07148 127 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 IGLL1P15814 213 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 YPEL3P61236 119 aaPredicted RBP7.64□□□□□ -1.19
NUP54-203ENST00000504173 NHLH2Q02577 135 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 ATP6V1FQ16864 119 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 TOMM20LQ6UXN7 152 aa7.64□□□□□ -1.19
NUP54-203ENST00000504173 TMEM144Q7Z5S9 345 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms