RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 MIC13Q5XKP0 118 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 FA2HQ7L5A8 372 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 ABHD5Q8WTS1 349 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 DOCK7Q96N67 2140 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.05□□□□□ -1.44
PDGFC-203ENST00000502773 B5MCH6 92 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 SAP30O75446 220 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 SPINK2P20155 84 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 UBE2G1P62253 170 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 RPL23P62829 140 aaKnown RBP6.05□□□□□ -1.44
PDGFC-203ENST00000502773 ZNF672Q499Z4 452 aaPredicted RBP6.05□□□□□ -1.44
PDGFC-203ENST00000502773 ODF3L1Q8IXM7 274 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 SPCS1Q9Y6A9 102 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 FREM1Q5H8C1 2179 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 LAMA3Q16787 3333 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 SNAI2O43623 268 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 ARL14EPLP0DKL9 152 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 DEFA4P12838 97 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 PSG5Q15238 335 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 MINOS1Q5TGZ0 78 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 SLC25A34Q6PIV7 304 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 DAZAP1Q96EP5 407 aaKnown RBP6.05□□□□□ -1.44
PDGFC-203ENST00000502773 MRPL20Q9BYC9 149 aaKnown RBP6.05□□□□□ -1.44
PDGFC-203ENST00000502773 HEATR1Q9H583 2144 aaKnown RBP6.05□□□□□ -1.44
PDGFC-203ENST00000502773 YAE1D1Q9NRH1 226 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 NDUFA4L2Q9NRX3 87 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 DPM3Q9P2X0 92 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 TBL2Q9Y4P3 447 aaKnown RBP6.05□□□□□ -1.44
PDGFC-203ENST00000502773 LSM4Q9Y4Z0 139 aaKnown RBP6.05□□□□□ -1.44
PDGFC-203ENST00000502773 MINOS1-NBL1R4GNA1 71 aa6.05□□□□□ -1.44
PDGFC-203ENST00000502773 NCOR1O75376 2440 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 IFITM10A6NMD0 228 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 FAM90A27PA6NNH2 459 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 HYPMO75409 117 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 KIR3DL3Q8N743 410 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 SNURFLB1AK76 121 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 RRHO14718 337 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 IER3P46695 156 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 SP5Q6BEB4 398 aaPredicted RBP6.04□□□□□ -1.44
PDGFC-203ENST00000502773 OR51G1Q8NGK1 321 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 OR1B1Q8NGR6 318 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 C8orf46Q8TAG6 207 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 C11orf52Q96A22 123 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 TRGV9Q99603 122 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 MGST2Q99735 147 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 GPR179Q6PRD1 2367 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 TCRBV4S1A1TA0A5B7 111 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 E7EQL1 145 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 ATXN7O15265 892 aaPredicted RBP6.04□□□□□ -1.44
PDGFC-203ENST00000502773 TYMSP04818 313 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 SPINK9Q5DT21 86 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 RASL11AQ6T310 242 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 C5orf24Q7Z6I8 188 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 FER1L6-AS1Q8NA97 138 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 ZNF114Q8NC26 417 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 SGMS2Q8NHU3 365 aa6.04□□□□□ -1.44
PDGFC-203ENST00000502773 OR2T8A6NH00 312 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PPBPP02775 128 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 HIST1H1EP10412 219 aaKnown RBP6.03□□□□□ -1.44
PDGFC-203ENST00000502773 UBE2L3P68036 154 aaKnown RBP6.03□□□□□ -1.44
PDGFC-203ENST00000502773 ZNF295-AS1Q8N0V1 137 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 SSMEM1Q8WWF3 244 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 CITED2Q99967 270 aaPredicted RBP6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PAXXQ9BUH6 204 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 OSTCQ9NRP0 149 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 HSPB8Q9UJY1 196 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 LOC105371242A0A075B767 164 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 SHISA9B4DS77 424 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 NDUFB4O95168 129 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 RNASE2P10153 161 aaKnown RBP6.03□□□□□ -1.44
PDGFC-203ENST00000502773 ZNF134P52741 427 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 ZNF726P1Q15940 193 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 TNXAQ16473 311 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 OR2K2Q8NGT1 345 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 VSIRQ9H7M9 311 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 CDC42EP3Q9UKI2 254 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 BRCA2P51587 3418 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 THBDP07204 575 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PMCHL1Q16048 86 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PYGO2Q9BRQ0 406 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 TMEM191AQ9H0A3 160 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 LINC00869P0C866 280 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 CSN1S1P47710 185 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PRR20EP86478 221 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PRR20CP86479 221 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PRR20DP86480 221 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PRR20BP86481 221 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PRR20AP86496 221 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 PRSS8Q16651 343 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 KIAA1644Q3SXP7 199 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 MPV17L2Q567V2 206 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 OR4F17Q8NGA8 305 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 ONECUT1Q9UBC0 465 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 UFC1Q9Y3C8 167 aa6.03□□□□□ -1.44
PDGFC-203ENST00000502773 FAM201AQ5SY85 155 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 MRPL52Q86TS9 123 aaKnown RBP6.02□□□□□ -1.45
PDGFC-203ENST00000502773 TMEM256Q8N2U0 113 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 THAP8Q8NA92 274 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 C5orf30Q96GV9 206 aa6.02□□□□□ -1.45
PDGFC-203ENST00000502773 TNFRSF19Q9NS68 423 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms