RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TENM2Q9NT68 2774 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 SHPKQ9UHJ6 478 aa11.9□□□□□ -0.5
NR1H3-227ENST00000498548 TRAV30A0A087WSZ9 112 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 IFNA10P01566 189 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 IGLC1P0CG04 106 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 BMI1P35226 326 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 STPG3Q8N7X2 389 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 OR1S2Q8NGQ3 325 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
NR1H3-227ENST00000498548 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 ACY3Q96HD9 319 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 METTL26Q96S19 204 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 HSPB7Q9UBY9 170 aa11.89□□□□□ -0.51
NR1H3-227ENST00000498548 A0A0J9YWU9 116 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 LCE6AA0A183 80 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 VAMP1P23763 118 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 OR10J1P30954 320 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 CMC4P56277 68 aaPredicted RBP11.88□□□□□ -0.51
NR1H3-227ENST00000498548 DEFB131AP59861 70 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 EWSR1Q01844 656 aaKnown RBP eCLIP11.88□□□□□ -0.51
NR1H3-227ENST00000498548 LEMD1Q68G75 181 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 Q6ZWC4 215 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 SRRQ9GZT4 340 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 RABAC1Q9UI14 185 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 RYR2Q92736 4967 aa11.88□□□□□ -0.51
NR1H3-227ENST00000498548 KIR2DL5BA0A0G2JN68 375 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 KIR2DL5BA0A0G2JPC4 375 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 UBE2CO00762 179 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 SCGB2A1O75556 95 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 SLC25A4P12235 298 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 CRYBB3P26998 211 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 P2RY1P47900 373 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 BAK1Q16611 211 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 TMEM128Q5BJH2 165 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 KIR2DL5AQ8N109 375 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 STXBP6Q8NFX7 210 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 KIR2DL5BQ8NHK3 375 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 IL17DQ8TAD2 202 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 Q8WTZ3 238 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 RNF183Q96D59 192 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 TMEM231Q9H6L2 316 aa11.87□□□□□ -0.51
NR1H3-227ENST00000498548 LINC00854A0A1B0GVQ3 168 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 A0A1W2PS18 150 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 SFT2D2O95562 160 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 CD5P06127 495 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 IAPPP10997 89 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 SRPXP78539 464 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 PPP1R1AQ13522 171 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 SPANXN2Q5MJ10 180 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 ETFRF1Q6IPR1 90 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 NOXA1Q86UR1 476 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 SLC25A21Q9BQT8 299 aaPredicted RBP11.86□□□□□ -0.51
NR1H3-227ENST00000498548 CSTL1Q9H114 145 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 TP53TG1Q9Y2A0 90 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 U3KQ87 197 aa11.86□□□□□ -0.51
NR1H3-227ENST00000498548 AGRNO00468 2067 aa11.85□□□□□ -0.51
NR1H3-227ENST00000498548 PITX3O75364 302 aa11.85□□□□□ -0.51
NR1H3-227ENST00000498548 IFNA4P05014 189 aa11.85□□□□□ -0.51
NR1H3-227ENST00000498548 HOXB5P09067 269 aa11.85□□□□□ -0.51
NR1H3-227ENST00000498548 YPEL3P61236 119 aaPredicted RBP11.85□□□□□ -0.51
NR1H3-227ENST00000498548 USF2Q15853 346 aaPredicted RBP11.85□□□□□ -0.51
NR1H3-227ENST00000498548 LYG2Q86SG7 212 aa11.85□□□□□ -0.51
NR1H3-227ENST00000498548 CACFD1Q9UGQ2 172 aa11.85□□□□□ -0.51
NR1H3-227ENST00000498548 U3KQE9 123 aa11.85□□□□□ -0.51
NR1H3-227ENST00000498548 K7EQG2 157 aa11.84□□□□□ -0.51
NR1H3-227ENST00000498548 IL4P05112 153 aa11.84□□□□□ -0.51
NR1H3-227ENST00000498548 HNRNPCP07910 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
NR1H3-227ENST00000498548 INPP1P49441 399 aa11.84□□□□□ -0.51
NR1H3-227ENST00000498548 PMS2P11Q13670 270 aa11.84□□□□□ -0.51
NR1H3-227ENST00000498548 CENPSQ8N2Z9 138 aa11.84□□□□□ -0.51
NR1H3-227ENST00000498548 NARS2Q96I59 477 aaKnown RBP11.84□□□□□ -0.51
NR1H3-227ENST00000498548 SDHCQ99643 169 aaPredicted RBP11.84□□□□□ -0.51
NR1H3-227ENST00000498548 MAGT1Q9H0U3 335 aa11.84□□□□□ -0.51
NR1H3-227ENST00000498548 PAIP2BQ9ULR5 123 aaKnown RBP11.84□□□□□ -0.51
NR1H3-227ENST00000498548 FLVCR2Q9UPI3 526 aa11.84□□□□□ -0.51
NR1H3-227ENST00000498548 DNAH1Q9P2D7 4330 aa11.84□□□□□ -0.51
NR1H3-227ENST00000498548 DUXBA0A1W2PPF3 345 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 MPTX1A8MV57 137 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 TOMM40O96008 361 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 ZNF688P0C7X2 276 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 RD3LP0DJH9 198 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 PSG1P11464 419 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 C16orf54Q6UWD8 224 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 LRTM2Q8N967 370 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 OR51G1Q8NGK1 321 aa11.83□□□□□ -0.52
NR1H3-227ENST00000498548 TRAV2A0A0B4J234 112 aa11.82□□□□□ -0.52
NR1H3-227ENST00000498548 KNCNA6PVL3 124 aa11.82□□□□□ -0.52
NR1H3-227ENST00000498548 DHRS2Q13268 280 aa11.82□□□□□ -0.52
NR1H3-227ENST00000498548 GAMTQ14353 236 aa11.82□□□□□ -0.52
NR1H3-227ENST00000498548 GGNBP1Q5YKI7 109 aa11.82□□□□□ -0.52
NR1H3-227ENST00000498548 TRIQKQ629K1 86 aa11.82□□□□□ -0.52
NR1H3-227ENST00000498548 GLMPQ8WWB7 406 aa11.82□□□□□ -0.52
NR1H3-227ENST00000498548 GRAMD2BQ96HH9 432 aa11.82□□□□□ -0.52
NR1H3-227ENST00000498548 PLECQ15149 4684 aaKnown RBP11.81□□□□□ -0.52
NR1H3-227ENST00000498548 IGKV1D-37A0A075B6S9 117 aa11.81□□□□□ -0.52
NR1H3-227ENST00000498548 WRBO00258 174 aa11.81□□□□□ -0.52
NR1H3-227ENST00000498548 CA1P00915 261 aaPredicted RBP11.81□□□□□ -0.52
NR1H3-227ENST00000498548 ZNF90Q03938 601 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms