RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 CD200P41217 278 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 CEBPGP53567 150 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 H2BFSP57053 126 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 LINC00313P59037 77 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 CCL7P80098 99 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 RUNX1Q01196 453 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 EIF3IQ13347 325 aaKnown RBP1.82□□□□□ -2.12
PTPRK-215ENST00000498284 SPOPLQ6IQ16 392 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 SFXN4Q6P4A7 337 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 COMMD7Q86VX2 200 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 TMEM86BQ8N661 226 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 TMEM161BQ8NDZ6 487 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 OR4C6Q8NH72 309 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 TBX5Q99593 518 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 DHRS9Q9BPW9 319 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 CXCL16Q9H2A7 254 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 ANK2Q01484 3957 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 ZGRF1Q86YA3 2104 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 CACNA1CQ13936 2221 aa1.82□□□□□ -2.12
PTPRK-215ENST00000498284 TLN2Q9Y4G6 2542 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 TGP01266 2768 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 IGHV3-73A0A0B4J1V6 119 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 DHRS12A0PJE2 317 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 C19orf71A6NCJ1 209 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 SERPINA1P01009 418 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 ISG15P05161 165 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 FABP1P07148 127 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 RPSAP08865 295 aaKnown RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 OPRM1P35372 400 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 PSMD8P48556 350 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 CDK9P50750 372 aaKnown RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 POLR2GP62487 172 aaKnown RBP eCLIP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 HERVK_113P63121 156 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 IFITM2Q01629 132 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 DR1Q01658 176 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 TMEM267Q0VDI3 215 aaPredicted RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 SRSF6Q13247 344 aaKnown RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 OR2F1Q13607 317 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 OGFRL1Q5TC84 451 aaPredicted RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 C1orf195Q5TG92 126 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 LCN8Q6JVE9 175 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 STX12Q86Y82 276 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 OR6V1Q8N148 313 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 OR2T4Q8NH00 348 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 PIGXQ8TBF5 258 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 HOPXQ9BPY8 73 aaPredicted RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 LXNQ9BS40 222 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 UPK3BQ9BT76 320 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 TIPINQ9BVW5 301 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 MRPL40Q9NQ50 206 aaKnown RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 TXNL4BQ9NX01 149 aaKnown RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 HDGFL3Q9Y3E1 203 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 SAMHD1Q9Y3Z3 626 aaKnown RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 CUBNO60494 3623 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 TNRC6AQ8NDV7 1962 aaKnown RBP1.81□□□□□ -2.12
PTPRK-215ENST00000498284 VPS13CQ709C8 3753 aa1.81□□□□□ -2.12
PTPRK-215ENST00000498284 C17orf51A8MQB3 221 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 ODF3BA8MYP8 253 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 FNDC10F2Z333 226 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 M0R036 132 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 KPNA3O00505 521 aaPredicted RBP1.8□□□□□ -2.12
PTPRK-215ENST00000498284 ACOX3O15254 700 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 IGLV3-27P01718 113 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 APOEP02649 317 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 ATP5G1P05496 136 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 CD7P09564 240 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 P0DMU3 169 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 FAM231AP0DMU4 169 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 FAM231CP0DMU5 169 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 MIPP30301 263 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 DAPP51397 102 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 TSPEAR-AS2P59090 65 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 FGF12P61328 243 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 HPCAP84074 193 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 RSU1Q15404 277 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 HACD4Q5VWC8 232 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 OR10K2Q6IF99 312 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 MYO7BQ6PIF6 2116 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 ALKAL1Q6UXT8 129 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 OR5B17Q8NGF7 314 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 OR10D3Q8NH80 312 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 C16orf78Q8WTQ4 265 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 ASB17Q8WXJ9 295 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 SELENOSQ9BQE4 189 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 MRPS26Q9BYN8 205 aaKnown RBP1.8□□□□□ -2.12
PTPRK-215ENST00000498284 TLNRD1Q9H1K6 362 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.8□□□□□ -2.12
PTPRK-215ENST00000498284 PAQR5Q9NXK6 330 aaPredicted RBP1.8□□□□□ -2.12
PTPRK-215ENST00000498284 HHLA2Q9UM44 414 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 AKAP6Q13023 2319 aa1.8□□□□□ -2.12
PTPRK-215ENST00000498284 TRPM6Q9BX84 2022 aa1.79□□□□□ -2.12
PTPRK-215ENST00000498284 SONP18583 2426 aaKnown RBP1.79□□□□□ -2.12
PTPRK-215ENST00000498284 TRAV8-1A0A0A6YYK1 113 aa1.79□□□□□ -2.12
PTPRK-215ENST00000498284 SMIM23A6NLE4 172 aa1.79□□□□□ -2.12
PTPRK-215ENST00000498284 OR5K4A6NMS3 321 aa1.79□□□□□ -2.12
PTPRK-215ENST00000498284 PGRMC1O00264 195 aaKnown RBP1.79□□□□□ -2.12
PTPRK-215ENST00000498284 UBFD1O14562 309 aaKnown RBP1.79□□□□□ -2.12
PTPRK-215ENST00000498284 GSTZ1O43708 216 aaPredicted RBP1.79□□□□□ -2.12
PTPRK-215ENST00000498284 CHP2O43745 196 aa1.79□□□□□ -2.12
PTPRK-215ENST00000498284 SSNA1O43805 119 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms