RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 TNFSF18Q9UNG2 199 aa10.46□□□□□ -0.73
CPNE1-227ENST00000498056 RNF222A6NCQ9 220 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 ZFP92A6NM28 416 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 M0QZ24 198 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 CCL24O00175 119 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 HSPB1P04792 205 aaKnown RBP10.45□□□□□ -0.74
CPNE1-227ENST00000498056 OR10J1P30954 320 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 HOXD3P31249 432 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-227ENST00000498056 S100A11P31949 105 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 SLURP1P55000 103 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 OR1N2Q8NGR9 330 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 AQP10Q96PS8 301 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 TXN2Q99757 166 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 CHRDL1Q9BU40 450 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 FBXL17Q9UF56 701 aa10.45□□□□□ -0.74
CPNE1-227ENST00000498056 ANK2Q01484 3957 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 GGCTO75223 188 aaKnown RBP10.44□□□□□ -0.74
CPNE1-227ENST00000498056 IGLC1P0CG04 106 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 ZP3P21754 424 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 FCGR2BP31994 310 aaPredicted RBP10.44□□□□□ -0.74
CPNE1-227ENST00000498056 FHL3Q13643 280 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 TIGITQ495A1 244 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 ZFP69Q49AA0 526 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 SPSB3Q6PJ21 355 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 TMEM116Q8NCL8 245 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 OR11H4Q8NGC9 324 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 ATP6V0BQ99437 205 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 ATP5SQ99766 215 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 GGACTQ9BVM4 153 aa10.44□□□□□ -0.74
CPNE1-227ENST00000498056 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
CPNE1-227ENST00000498056 FNDC10F2Z333 226 aa10.43□□□□□ -0.74
CPNE1-227ENST00000498056 PFDN1O60925 122 aa10.43□□□□□ -0.74
CPNE1-227ENST00000498056 C1QBP02746 253 aa10.43□□□□□ -0.74
CPNE1-227ENST00000498056 FGF7P21781 194 aa10.43□□□□□ -0.74
CPNE1-227ENST00000498056 ADMP35318 185 aa10.43□□□□□ -0.74
CPNE1-227ENST00000498056 RELQ04864 619 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-227ENST00000498056 NEURL2Q9BR09 285 aa10.43□□□□□ -0.74
CPNE1-227ENST00000498056 MFFQ9GZY8 342 aa10.43□□□□□ -0.74
CPNE1-227ENST00000498056 IGHV3OR16-8A0A075B7F1 116 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 DFFBO76075 338 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 YIF1AO95070 293 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 OR2C1O95371 312 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 CTSGP08311 255 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 MYCNOSP40205 109 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 EIF2B2P49770 351 aaKnown RBP10.42□□□□□ -0.74
CPNE1-227ENST00000498056 SYNJ2BPP57105 145 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 ATP6V1FQ16864 119 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 TEPPQ6URK8 271 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 TREML4Q6UXN2 200 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 TMEM144Q7Z5S9 345 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 THAP8Q8NA92 274 aa10.42□□□□□ -0.74
CPNE1-227ENST00000498056 IGKV1D-37A0A075B6S9 117 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 IGKV1OR2-108A0A075B7D4 117 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 ZNF320A2RRD8 509 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 IGKV1-17P01599 117 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 FABP1P07148 127 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 OR2F1Q13607 317 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 VWC2Q2TAL6 325 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 ZNF600Q6ZNG1 722 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 C1QL4Q86Z23 238 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 C20orf24Q9BUV8 137 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 NPVFQ9HCQ7 196 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 WDR83OSQ9Y284 106 aa10.41□□□□□ -0.74
CPNE1-227ENST00000498056 PUS1Q9Y606 427 aaKnown RBP eCLIP10.41□□□□□ -0.74
CPNE1-227ENST00000498056 HMSDA8MTL9 139 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 NDUFA4O00483 81 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 TOMM40O96008 361 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 ZNF90Q03938 601 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 ZNF266Q14584 549 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 ZNF345Q14585 488 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 BTNL8Q6UX41 500 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 CYP2G1PQ6ZSU1 146 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 TMEM190Q8WZ59 177 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 DLX4Q92988 240 aaPredicted RBP10.4□□□□□ -0.74
CPNE1-227ENST00000498056 RCC1LQ96I51 464 aaKnown RBP10.4□□□□□ -0.74
CPNE1-227ENST00000498056 HYLS1Q96M11 299 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 TRGV9Q99603 122 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 MGST2Q99735 147 aa10.4□□□□□ -0.74
CPNE1-227ENST00000498056 OVOL1O14753 267 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 AGPAT2O15120 278 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 IFNA5P01569 189 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 IL4P05112 153 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 CXCL2P19875 107 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 YPEL3P61236 119 aaPredicted RBP10.39□□□□□ -0.75
CPNE1-227ENST00000498056 LYZP61626 148 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 RAB31Q13636 194 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 FAM106AQ4KMX7 169 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 UNQ9165/PRO28630Q6UXU0 137 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 LINC00482Q8N8I6 264 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 SPATA3Q8NHX4 192 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 PBDC1Q9BVG4 233 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 GGTLC1Q9BX51 225 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 NPCDR1Q9BY65 106 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 ARL6Q9H0F7 186 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 WFDC1Q9HC57 220 aa10.39□□□□□ -0.75
CPNE1-227ENST00000498056 KANTRA0A1W2PQU2 76 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 ZNF207O43670 478 aaKnown RBP10.38□□□□□ -0.75
CPNE1-227ENST00000498056 LINC00869P0C866 280 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 RD3LP0DJH9 198 aa10.38□□□□□ -0.75
CPNE1-227ENST00000498056 PSG1P11464 419 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms