RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 KRTAP27-1Q3LI81 207 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 CRIP3Q6Q6R5 217 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 GLIPR1L1Q6UWM5 242 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 GJC3Q8NFK1 279 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 OR5A1Q8NGJ0 315 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 OR1F12Q8NHA8 337 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 MRPL30Q8TCC3 161 aaKnown RBP5.38□□□□□ -1.55
HOXA9-206ENST00000497089 RAB1CQ92928 201 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 TIMD4Q96H15 378 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 AP1S3Q96PC3 154 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 PMCHL2Q9BQD1 86 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 TXNDC17Q9BRA2 123 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 ZNF286AQ9HBT8 521 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 NRN1Q9NPD7 142 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 MRPL22Q9NWU5 206 aaKnown RBP5.38□□□□□ -1.55
HOXA9-206ENST00000497089 B9D1Q9UPM9 204 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 POLR1DQ9Y2S0 133 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 PPIAL4AQ9Y536 164 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 LHFPL6Q9Y693 200 aa5.38□□□□□ -1.55
HOXA9-206ENST00000497089 DYSFO75923 2080 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 PPIAL4EA0A075B759 164 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 PPIAL4CA0A0B4J2A2 164 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 GAGE10A6NGK3 116 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 PPIAL4DF5H284 164 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 H3BSH0 61 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 J3QLI3 93 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 MLNRO43193 412 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 SPRY3O43610 288 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 PDE6DO43924 150 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 NUPR1O60356 82 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 HAND1O96004 215 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 HLA-DRB1P01911 266 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 PPIAL4FP0DN26 164 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 ZNF823P16415 610 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 AMTP48728 403 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 SEC11AP67812 179 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 KRTAP24-1Q3LI83 254 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 SPRNQ5BIV9 151 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 FFAR4Q5NUL3 377 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 FAM162BQ5T6X4 162 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 AMMECR1LQ6DCA0 310 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 CCDC144NLQ6NUI1 221 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 LCN15Q6UWW0 184 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 Q6ZR03 302 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 IL17RELQ6ZVW7 336 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 LYZL2Q7Z4W2 148 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 CALHM1Q8IU99 346 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 FAM58AQ8N1B3 248 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 TEX29Q8N6K0 151 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 SGMS2Q8NHU3 365 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 LHX4Q969G2 390 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 APOBEC3DQ96AK3 386 aaPredicted RBP5.37□□□□□ -1.55
HOXA9-206ENST00000497089 ARHGAP5-AS1Q96IT6 56 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 TSSK2Q96PF2 358 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 UHRF2Q96PU4 802 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 PRR25Q96S07 402 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 RAB40CQ96S21 281 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 AMELYQ99218 206 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 NICN1Q9BSH3 213 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 PECRQ9BY49 303 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 G6PC2Q9NQR9 355 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 SLC39A9Q9NUM3 307 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 HIF1ANQ9NWT6 349 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 PPP1R3CQ9UQK1 317 aa5.37□□□□□ -1.55
HOXA9-206ENST00000497089 A0A0A6YYD4 124 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 CTXND1A0A1B0GTU2 59 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 IFNL4K9M1U5 179 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 SOCS1O15524 211 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 TIMM8AO60220 97 aaPredicted RBP5.36□□□□□ -1.55
HOXA9-206ENST00000497089 SSSCA1O60232 199 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 FSTL3O95633 263 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 SLC25A6P12236 298 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 CKS1BP61024 79 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 HERV-K104P61576 105 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 HBG1P69891 147 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 HBG2P69892 147 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 TNFAIP6P98066 277 aaPredicted RBP5.36□□□□□ -1.55
HOXA9-206ENST00000497089 PSG9Q00887 426 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 OTPQ5XKR4 325 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 NEGR1Q7Z3B1 354 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 C5orf17Q8NAS9 161 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 OR4F17Q8NGA8 305 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 OR51T1Q8NGJ9 327 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 OR1B1Q8NGR6 318 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 PLPPR1Q8TBJ4 325 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 CCL17Q92583 94 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 SFRP2Q96HF1 295 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 OR4F4Q96R69 305 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 TM2D1Q9BX74 207 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 C1QTNF5Q9BXJ0 243 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 GNB1LQ9BYB4 327 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 PNRC2Q9NPJ4 139 aaKnown RBP5.36□□□□□ -1.55
HOXA9-206ENST00000497089 RPRMQ9NS64 109 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 SERTAD4Q9NUC0 356 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 LIN7CQ9NUP9 197 aaKnown RBP5.36□□□□□ -1.55
HOXA9-206ENST00000497089 ANXA10Q9UJ72 324 aa5.36□□□□□ -1.55
HOXA9-206ENST00000497089 DNHD1Q96M86 4753 aa5.35□□□□□ -1.55
HOXA9-206ENST00000497089 A6NDN8 102 aa5.35□□□□□ -1.55
HOXA9-206ENST00000497089 FOXI3A8MTJ6 420 aaPredicted RBP5.35□□□□□ -1.55
HOXA9-206ENST00000497089 IQCF6A8MYZ5 107 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms