RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 PLA2G2EQ9NZK7 142 aa13.37□□□□□ -0.27
LMNA-216ENST00000496738 NAV3Q8IVL0 2385 aa13.36□□□□□ -0.27
LMNA-216ENST00000496738 INS-IGF2F8WCM5 200 aa13.36□□□□□ -0.27
LMNA-216ENST00000496738 IGHV3-48P01763 117 aa13.36□□□□□ -0.27
LMNA-216ENST00000496738 FAM157CP0CG43 387 aa13.36□□□□□ -0.27
LMNA-216ENST00000496738 KHDC3LQ587J8 217 aa13.36□□□□□ -0.27
LMNA-216ENST00000496738 ISOC2Q96AB3 205 aa13.36□□□□□ -0.27
LMNA-216ENST00000496738 ZNF48Q96MX3 618 aaPredicted RBP13.36□□□□□ -0.27
LMNA-216ENST00000496738 PARP11Q9NR21 331 aa13.36□□□□□ -0.27
LMNA-216ENST00000496738 A6NDX4 124 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 LINC01548A6NM66 108 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 SFTA3P0C7M3 94 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 MFAP2P55001 183 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 ARSJQ5FYB0 599 aaPredicted RBP13.35□□□□□ -0.27
LMNA-216ENST00000496738 SCGB1C1Q8TD33 95 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 ELOA3CA0A087WX78 387 aaPredicted RBP13.35□□□□□ -0.27
LMNA-216ENST00000496738 CD5LO43866 347 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 HLA-DRB1P01911 266 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 RPLP1P05386 114 aaKnown RBP13.35□□□□□ -0.27
LMNA-216ENST00000496738 AKR1C3P42330 323 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 NDUFA6P56556 154 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 HIST3H2BBQ8N257 126 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 FAM210BQ96KR6 192 aa13.35□□□□□ -0.27
LMNA-216ENST00000496738 WDR61Q9GZS3 305 aaKnown RBP13.35□□□□□ -0.27
LMNA-216ENST00000496738 PHOX2AO14813 284 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 PRH1P02810 166 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 AMY1AP04745 511 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 ATP6V1FQ16864 119 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 ASPHD1Q5U4P2 390 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 TMEM182Q6ZP80 229 aaPredicted RBP13.34□□□□□ -0.27
LMNA-216ENST00000496738 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 MRPL41Q8IXM3 137 aaKnown RBP13.34□□□□□ -0.27
LMNA-216ENST00000496738 IGHV3-21A0A0B4J1V1 117 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 SUB1P53999 127 aaKnown RBP eCLIP13.34□□□□□ -0.276e-11■■■■■ 66.2
LMNA-216ENST00000496738 LFNGQ8NES3 379 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 OR2G3Q8NGZ4 309 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 RPH3ALQ9UNE2 315 aa13.34□□□□□ -0.27
LMNA-216ENST00000496738 ATP6V0E1O15342 81 aa13.33□□□□□ -0.27
LMNA-216ENST00000496738 GGCTO75223 188 aaKnown RBP13.33□□□□□ -0.27
LMNA-216ENST00000496738 EGR2P11161 476 aaPredicted RBP13.33□□□□□ -0.27
LMNA-216ENST00000496738 OPRK1P41145 380 aa13.33□□□□□ -0.27
LMNA-216ENST00000496738 IER3P46695 156 aa13.33□□□□□ -0.27
LMNA-216ENST00000496738 SULT1A2P50226 295 aa13.33□□□□□ -0.27
LMNA-216ENST00000496738 VWC2Q2TAL6 325 aa13.33□□□□□ -0.27
LMNA-216ENST00000496738 FAM24BQ8N5W8 94 aa13.33□□□□□ -0.27
LMNA-216ENST00000496738 NUDT10Q8NFP7 164 aa13.33□□□□□ -0.27
LMNA-216ENST00000496738 PPP1R2P9O14990 202 aa13.33□□□□□ -0.28
LMNA-216ENST00000496738 SEC11BP0C7V7 166 aa13.33□□□□□ -0.28
LMNA-216ENST00000496738 DLK1P80370 383 aa13.33□□□□□ -0.28
LMNA-216ENST00000496738 ECSCRQ19T08 205 aa13.33□□□□□ -0.28
LMNA-216ENST00000496738 C9orf139Q6ZV77 190 aa13.33□□□□□ -0.28
LMNA-216ENST00000496738 TAF15Q92804 592 aaKnown RBP eCLIP13.33□□□□□ -0.28
LMNA-216ENST00000496738 TMEM238C9JI98 176 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 DEFA4P12838 97 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 SRP14P37108 136 aaKnown RBP13.32□□□□□ -0.28
LMNA-216ENST00000496738 BTNL8Q6UX41 500 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 TREML4Q6UXN2 200 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 OR2T6Q8NHC8 308 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 WNT10AQ9GZT5 417 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 FNDC4Q9H6D8 234 aaPredicted RBP13.32□□□□□ -0.28
LMNA-216ENST00000496738 F11RQ9Y624 299 aaKnown RBP13.32□□□□□ -0.28
LMNA-216ENST00000496738 MYO9AB2RTY4 2548 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 C7orf77A4D0Y5 90 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 ZNF114Q8NC26 417 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 OR5T1Q8NG75 326 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 PITPNC1Q9UKF7 332 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 NOTCH2Q04721 2471 aa13.32□□□□□ -0.28
LMNA-216ENST00000496738 HOXA3O43365 443 aaPredicted RBP13.31□□□□□ -0.28
LMNA-216ENST00000496738 SCAF4O95104 1147 aaKnown RBP13.31□□□□□ -0.28
LMNA-216ENST00000496738 FHITP49789 147 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 CD69Q07108 199 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 JOSD1Q15040 202 aaPredicted RBP13.31□□□□□ -0.28
LMNA-216ENST00000496738 OR1P1Q8NH06 330 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 GNPNAT1Q96EK6 184 aaPredicted RBP13.31□□□□□ -0.28
LMNA-216ENST00000496738 DUX5Q96PT3 197 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 LINC00527Q9UJ94 153 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 ELLP55199 621 aaPredicted RBP13.31□□□□□ -0.28
LMNA-216ENST00000496738 ATP5IP56385 69 aaPredicted RBP13.31□□□□□ -0.28
LMNA-216ENST00000496738 BLCAPP62952 87 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 Q6YL49 198 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 MRPL52Q86TS9 123 aaKnown RBP13.31□□□□□ -0.28
LMNA-216ENST00000496738 ACY3Q96HD9 319 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 WDR83OSQ9Y284 106 aa13.31□□□□□ -0.28
LMNA-216ENST00000496738 G3V318 75 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 TCF21O43680 179 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 CD5P06127 495 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 AWAT1Q58HT5 328 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 Q6ZS46 218 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 SIGLECL1Q8N7X8 197 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 SAT2Q96F10 170 aaPredicted RBP13.3□□□□□ -0.28
LMNA-216ENST00000496738 SRSF8Q9BRL6 282 aaKnown RBP13.3□□□□□ -0.28
LMNA-216ENST00000496738 TMUB1Q9BVT8 246 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 NPCDR1Q9BY65 106 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 HRH4Q9H3N8 390 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 MRPL36Q9P0J6 103 aaKnown RBP13.3□□□□□ -0.28
LMNA-216ENST00000496738 TLN2Q9Y4G6 2542 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 ACANP16112 2415 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 HAGHQ16775 308 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 UNQ5815/PRO19632Q6UWF5 114 aa13.3□□□□□ -0.28
LMNA-216ENST00000496738 Q6ZRG5 221 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms