RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZC4H2Q9NQZ6 224 aa16.77■□□□□ 0.27
C9orf3-222ENST00000496567 MRPL36Q9P0J6 103 aaKnown RBP16.77■□□□□ 0.27
C9orf3-222ENST00000496567 PPP5D1E7EU14 171 aa16.76■□□□□ 0.27
C9orf3-222ENST00000496567 NUPL2O15504 423 aaKnown RBP16.76■□□□□ 0.27
C9orf3-222ENST00000496567 GGCTO75223 188 aaKnown RBP16.76■□□□□ 0.27
C9orf3-222ENST00000496567 ZP3P21754 424 aa16.76■□□□□ 0.27
C9orf3-222ENST00000496567 NHLH2Q02577 135 aa16.76■□□□□ 0.27
C9orf3-222ENST00000496567 LILRB2Q8N423 598 aa16.76■□□□□ 0.27
C9orf3-222ENST00000496567 INO80EQ8NBZ0 244 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-222ENST00000496567 BMPR1BO00238 502 aa16.75■□□□□ 0.27
C9orf3-222ENST00000496567 ATP6V1FQ16864 119 aa16.75■□□□□ 0.27
C9orf3-222ENST00000496567 HSPB11Q9Y547 144 aa16.75■□□□□ 0.27
C9orf3-222ENST00000496567 SMCO3A2RU48 225 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 PF4P02776 101 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 CTSGP08311 255 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 AKR1C1Q04828 323 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 FHL3Q13643 280 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 RPEL1Q2QD12 228 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 OR1S2Q8NGQ3 325 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 AQP10Q96PS8 301 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 DUX3Q96PT4 197 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 NPVFQ9HCQ7 196 aa16.74■□□□□ 0.27
C9orf3-222ENST00000496567 OR10J1P30954 320 aa16.73■□□□□ 0.27
C9orf3-222ENST00000496567 TMEM144Q7Z5S9 345 aa16.73■□□□□ 0.27
C9orf3-222ENST00000496567 OR5C1Q8NGR4 320 aa16.73■□□□□ 0.27
C9orf3-222ENST00000496567 CHRDL1Q9BU40 450 aa16.73■□□□□ 0.27
C9orf3-222ENST00000496567 TNFSF18Q9UNG2 199 aa16.73■□□□□ 0.27
C9orf3-222ENST00000496567 HOXD3P31249 432 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-222ENST00000496567 RELQ04864 619 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-222ENST00000496567 UQCC1Q9NVA1 299 aa16.72■□□□□ 0.27
C9orf3-222ENST00000496567 ZFP92A6NM28 416 aa16.72■□□□□ 0.27
C9orf3-222ENST00000496567 OR2C1O95371 312 aa16.72■□□□□ 0.27
C9orf3-222ENST00000496567 IGLC1P0CG04 106 aa16.72■□□□□ 0.27
C9orf3-222ENST00000496567 ADMP35318 185 aa16.72■□□□□ 0.27
C9orf3-222ENST00000496567 TMEM147Q9BVK8 224 aa16.72■□□□□ 0.27
C9orf3-222ENST00000496567 HMSDA8MTL9 139 aa16.71■□□□□ 0.27
C9orf3-222ENST00000496567 ARPC5O15511 151 aa16.71■□□□□ 0.27
C9orf3-222ENST00000496567 VWC2Q2TAL6 325 aa16.71■□□□□ 0.27
C9orf3-222ENST00000496567 LAMTOR1Q6IAA8 161 aa16.71■□□□□ 0.27
C9orf3-222ENST00000496567 GPHB5Q86YW7 130 aa16.71■□□□□ 0.27
C9orf3-222ENST00000496567 C9orf62Q8N4C0 152 aa16.71■□□□□ 0.27
C9orf3-222ENST00000496567 THAP8Q8NA92 274 aa16.71■□□□□ 0.27
C9orf3-222ENST00000496567 IGKV1-17P01599 117 aa16.7■□□□□ 0.26
C9orf3-222ENST00000496567 SLURP1P55000 103 aa16.7■□□□□ 0.26
C9orf3-222ENST00000496567 FAM106AQ4KMX7 169 aa16.7■□□□□ 0.26
C9orf3-222ENST00000496567 ANK2Q01484 3957 aa16.7■□□□□ 0.26
C9orf3-222ENST00000496567 TSPAN15O95858 294 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 FABP1P07148 127 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 YPEL3P61236 119 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-222ENST00000496567 CLINT1Q14677 625 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 LGALSLQ3ZCW2 172 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-222ENST00000496567 TIGITQ495A1 244 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 TEPPQ6URK8 271 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 TREML4Q6UXN2 200 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 ZNF600Q6ZNG1 722 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 TRGV9Q99603 122 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 BOLA1Q9Y3E2 137 aa16.69■□□□□ 0.26
C9orf3-222ENST00000496567 RNF222A6NCQ9 220 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 NDUFA4O00483 81 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 DFFBO76075 338 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 CXCL2P19875 107 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 KLF5Q13887 457 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-222ENST00000496567 ATP5SQ99766 215 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 MFFQ9GZY8 342 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 IGKV1D-37A0A075B6S9 117 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 IGKV1OR2-108A0A075B7D4 117 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 IGHV3-35A0A0C4DH35 117 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 C1QL4Q86Z23 238 aa16.68■□□□□ 0.26
C9orf3-222ENST00000496567 DLX4Q92988 240 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-222ENST00000496567 UBE2L5PA0A1B0GUS4 154 aa16.67■□□□□ 0.26
C9orf3-222ENST00000496567 AP2S1P53680 142 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-222ENST00000496567 RAB31Q13636 194 aa16.67■□□□□ 0.26
C9orf3-222ENST00000496567 LINC00482Q8N8I6 264 aa16.67■□□□□ 0.26
C9orf3-222ENST00000496567 Q8WTZ3 238 aa16.67■□□□□ 0.26
C9orf3-222ENST00000496567 SMIM3Q9BZL3 60 aa16.67■□□□□ 0.26
C9orf3-222ENST00000496567 WDR83OSQ9Y284 106 aa16.67■□□□□ 0.26
C9orf3-222ENST00000496567 LSM4Q9Y4Z0 139 aaKnown RBP16.67■□□□□ 0.26
C9orf3-222ENST00000496567 TOMM40O96008 361 aa16.66■□□□□ 0.26
C9orf3-222ENST00000496567 RD3LP0DJH9 198 aa16.66■□□□□ 0.26
C9orf3-222ENST00000496567 SYNJ2BPP57105 145 aa16.66■□□□□ 0.26
C9orf3-222ENST00000496567 OR2F1Q13607 317 aa16.66■□□□□ 0.26
C9orf3-222ENST00000496567 FBXL17Q9UF56 701 aa16.66■□□□□ 0.26
C9orf3-222ENST00000496567 ZNF320A2RRD8 509 aa16.65■□□□□ 0.26
C9orf3-222ENST00000496567 LGALS9O00182 355 aa16.65■□□□□ 0.26
C9orf3-222ENST00000496567 MPDU1O75352 247 aa16.65■□□□□ 0.26
C9orf3-222ENST00000496567 YIF1AO95070 293 aa16.65■□□□□ 0.26
C9orf3-222ENST00000496567 ZNF345Q14585 488 aa16.65■□□□□ 0.26
C9orf3-222ENST00000496567 REC114Q7Z4M0 266 aa16.65■□□□□ 0.26
C9orf3-222ENST00000496567 PUS1Q9Y606 427 aaKnown RBP eCLIP16.65■□□□□ 0.26
C9orf3-222ENST00000496567 OVOL1O14753 267 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 IFNA5P01569 189 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 SELENOTP62341 195 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 ZNF90Q03938 601 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 BTNL8Q6UX41 500 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 TMEM190Q8WZ59 177 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 PEMTQ9UBM1 199 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 CFDP00746 253 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-222ENST00000496567 PSG1P11464 419 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 ZNF266Q14584 549 aa16.64■□□□□ 0.25
C9orf3-222ENST00000496567 TOMM20LQ6UXN7 152 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms