RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 CD7P09564 240 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 IGHV2-26A0A0B4J1V2 119 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 A8MWP6 167 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 ST6GALNAC6Q969X2 333 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 OTORQ9NRC9 128 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 ZNF319Q9P2F9 582 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 LCTP09848 1927 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 FOXA3P55318 350 aaPredicted RBP10.9□□□□□ -0.66
PTPRF-215ENST00000496447 CKS1BP61024 79 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 NR2C2APQ86WQ0 139 aa10.9□□□□□ -0.66
PTPRF-215ENST00000496447 A0A1B0GWJ7 208 aa10.9□□□□□ -0.67
PTPRF-215ENST00000496447 RAMP3O60896 148 aa10.9□□□□□ -0.67
PTPRF-215ENST00000496447 TSPAN13O95857 204 aa10.9□□□□□ -0.67
PTPRF-215ENST00000496447 ADMP35318 185 aa10.9□□□□□ -0.67
PTPRF-215ENST00000496447 C3orf36Q3SXR2 165 aa10.9□□□□□ -0.67
PTPRF-215ENST00000496447 ZNF585BQ52M93 769 aa10.9□□□□□ -0.67
PTPRF-215ENST00000496447 TTC9CQ8N5M4 171 aa10.9□□□□□ -0.67
PTPRF-215ENST00000496447 ZNF664Q8N3J9 261 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 FER1L6-AS1Q8NA97 138 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
PTPRF-215ENST00000496447 FNDC4Q9H6D8 234 aaPredicted RBP10.89□□□□□ -0.67
PTPRF-215ENST00000496447 CHD5Q8TDI0 1954 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 A0A1B0GUT8 65 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 SRRM5B3KS81 715 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 PAX8Q06710 450 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 TMEM219Q86XT9 240 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 TMEM160Q9NX00 188 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 EREGO14944 169 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 SAP30O75446 220 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 GAGE1Q13065 139 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 Q6ZS92 163 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 OR2K2Q8NGT1 345 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 TMEM8BA6NDV4 472 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 TMEM178BH3BS89 294 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 OR10J3Q5JRS4 329 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 PAQR4Q8N4S7 273 aaPredicted RBP10.89□□□□□ -0.67
PTPRF-215ENST00000496447 ZNF525Q8N782 197 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 ZNF414Q96IQ9 312 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 PDCD11Q14690 1871 aaKnown RBP10.89□□□□□ -0.67
PTPRF-215ENST00000496447 MPZP25189 248 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 LRTM2Q8N967 370 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 OR5AN1Q8NGI8 311 aa10.89□□□□□ -0.67
PTPRF-215ENST00000496447 DUTP33316 252 aaKnown RBP10.88□□□□□ -0.67
PTPRF-215ENST00000496447 ATP5G3P48201 142 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 KLRD1Q13241 179 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 C18orf15Q96N68 181 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 TOMM7Q9P0U1 55 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 TDGF1P13385 188 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 ST20Q9HBF5 79 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 SDK2Q58EX2 2172 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 H3BRM9 83 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 CFAP161Q6P656 301 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 DOCK6Q96HP0 2047 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 PRCDQ00LT1 54 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 TMEM200BQ69YZ2 307 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 C18orf12Q96KH6 178 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 SCGB3A1Q96QR1 104 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
PTPRF-215ENST00000496447 FBLN5Q9UBX5 448 aa10.88□□□□□ -0.67
PTPRF-215ENST00000496447 MBD3L4A6NDZ8 208 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-215ENST00000496447 MBD3L3A6NE82 208 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-215ENST00000496447 MBD3L5A6NJ08 208 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-215ENST00000496447 OR11H12B2RN74 326 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 IGHV1-8P0DP01 117 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 MST1P26927 711 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 BMPERQ8N8U9 685 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 OR11H1Q8NG94 326 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 OR11H2Q8NH07 326 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 MBD3L2Q8NHZ7 208 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-215ENST00000496447 SSC4DQ8WTU2 575 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 NABP1Q96AH0 204 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 RPUSD1Q9UJJ7 312 aaKnown RBP10.87□□□□□ -0.67
PTPRF-215ENST00000496447 SELLP14151 372 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 Q6AWC8 147 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 OR10W1Q8NGF6 305 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 ASCL2Q99929 193 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 BRD3OSQ6XYD6 125 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 A0A087WV48 116 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 FABP5P3A8MUU1 101 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 PRR32B1ATL7 298 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 ESDP10768 282 aa10.87□□□□□ -0.67
PTPRF-215ENST00000496447 TRGV4A0A0C4DH28 118 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 MLNRO43193 412 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 SRD5A1P18405 259 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 TPTE2P1Q5T6R2 138 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 MINOS1Q5TGZ0 78 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 CYSLTR1Q9Y271 337 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 MINOS1-NBL1R4GNA1 71 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 HEATR5BQ9P2D3 2071 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 H3BUX3 64 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 GZMBP10144 247 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 GNG5P63218 68 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 ESPL1Q14674 2120 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 A0A1B0GW15 77 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 DNAL4O96015 105 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 DOCK4Q8N1I0 1966 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 H0YIZ8 118 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 APOHP02749 345 aaPredicted RBP10.86□□□□□ -0.67
PTPRF-215ENST00000496447 SLC25A16P16260 332 aa10.86□□□□□ -0.67
PTPRF-215ENST00000496447 FAM19A2Q8N3H0 131 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms