RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 DHRS2Q13268 280 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 TATDN3Q17R31 274 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 RTL8BQ17RB0 113 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 ANKRD55Q3KP44 614 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 SELENOHQ8IZQ5 122 aaKnown RBP4.87□□□□□ -1.63
VIM-207ENST00000495528 C12orf45Q8N5I9 185 aaPredicted RBP4.87□□□□□ -1.63
VIM-207ENST00000495528 OR1N2Q8NGR9 330 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 OR2T10Q8NGZ9 312 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 ZNF431Q8TF32 576 aaPredicted RBP4.87□□□□□ -1.63
VIM-207ENST00000495528 C4orf3Q8WVX3 66 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 FLYWCH2Q96CP2 140 aaKnown RBP4.87□□□□□ -1.63
VIM-207ENST00000495528 GON7Q9BXV9 100 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 TMEM222Q9H0R3 208 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 OR51J1Q9H342 316 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 GNB4Q9HAV0 340 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 WASHC3Q9Y3C0 194 aa4.87□□□□□ -1.63
VIM-207ENST00000495528 C13orf42A0A1B0GVH6 325 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 SRRM4A7MD48 611 aaKnown RBP4.86□□□□□ -1.63
VIM-207ENST00000495528 H0Y980 276 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 I3L521 148 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 TXNL1O43396 289 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 SSNA1O43805 119 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 PRAF2O60831 178 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 S1PR2O95136 353 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 CDS2O95674 445 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 HPRT1P00492 218 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 HRASP01112 189 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 IGKV1-39P01597 117 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 IGKV1-16P04430 117 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 IGKV1D-39P04432 117 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 IGF1P05019 195 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 VDAC1P21796 283 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 UCP1P25874 307 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 CNTFRP26992 372 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 PSMB8P28062 276 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 G6PCP35575 357 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 KIR2DS2P43631 304 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 ADAMTSL4-AS1Q5T5F5 129 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 FAM71F2Q6NXP2 309 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 SSX9Q7RTT3 188 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 LYZL2Q7Z4W2 148 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 ZNF429Q86V71 674 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 VKORC1L1Q8N0U8 176 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 LGI3Q8N145 548 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 TCTEX1D1Q8N7M0 179 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 COQ8AQ8NI60 647 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 LHFPL5Q8TAF8 219 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 MYOZ3Q8TDC0 251 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 CD300LFQ8TDQ1 290 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 DCUN1D4Q92564 292 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 GALNT14Q96FL9 552 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 UBE2E2Q96LR5 201 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 OR5B12Q96R08 314 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 CLCC1Q96S66 551 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 PHB2Q99623 299 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 RASL11BQ9BPW5 248 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 MED28Q9H204 178 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 STARD9Q9P2P6 4700 aa4.86□□□□□ -1.63
VIM-207ENST00000495528 SNRPGP15A8MWD9 76 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 FAM25EA8MYX2 175 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 G3V318 75 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 OVOL1O14753 267 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 CREBL2O60519 120 aaPredicted RBP4.85□□□□□ -1.63
VIM-207ENST00000495528 ADAP1O75689 374 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 B3GALNT1O75752 331 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 SIX6O95475 246 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 MOSP00540 346 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 OR8U8P0C7N1 319 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 GP9P14770 177 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 NQO2P16083 231 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 LGALS7P47929 136 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 ZNF616Q08AN1 781 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 ADAMTSL5Q6ZMM2 481 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 H2BFWTQ7Z2G1 175 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 PDPNQ86YL7 162 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 FAM71E2Q8N5Q1 922 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 ZNF491Q8N8L2 437 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 OR4S2Q8NH73 311 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 RNASE11Q8TAA1 199 aaKnown RBP4.85□□□□□ -1.63
VIM-207ENST00000495528 MITD1Q8WV92 249 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 DLX4Q92988 240 aaPredicted RBP4.85□□□□□ -1.63
VIM-207ENST00000495528 RBPMSQ93062 196 aaKnown RBP4.85□□□□□ -1.63
VIM-207ENST00000495528 GPR146Q96CH1 333 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 SEC22AQ96IW7 307 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 TMEM56Q96MV1 263 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 FBXL15Q9H469 300 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 EDA2RQ9HAV5 297 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 FAM212BQ9NTI7 297 aaPredicted RBP4.85□□□□□ -1.63
VIM-207ENST00000495528 WSB1Q9Y6I7 421 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 TMEM56-RWDD3S4R434 201 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 SORL1Q92673 2214 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 LYSTQ99698 3801 aa4.85□□□□□ -1.63
VIM-207ENST00000495528 TRAV3A0A0B4J244 114 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 A0A0B4J2A0 478 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 A0A0G2JRQ6 117 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 C7orf66A4D0T2 115 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 C5orf51A6NDU8 294 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 FCN1O00602 326 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 CCSO14618 274 aa4.84□□□□□ -1.63
VIM-207ENST00000495528 RBFOX2O43251 390 aaKnown RBP eCLIP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms