RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	NAV3	Q8IVL0	2385 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	IGHV3-21	A0A0B4J1V1	117 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	NPS	P0C0P6	89 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	LCN12	Q6JVE5	192 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	KLHDC1	Q8N7A1	406 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	OR2D3	Q8NGH3	330 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	ASCL3	Q9NQ33	180 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	IGHV3-72	A0A0B4J1Y9	119 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	HIST1H1E	P10412	219 aa	Known RBP	10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PRRX1	P54821	245 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	WT1-AS	Q06250	92 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	C21orf62-AS1	Q17RA5	79 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071		Q56UQ5	140 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TMEM108	Q6UXF1	575 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	MRPL52	Q86TS9	123 aa	Known RBP	10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	SH3BGRL2	Q9UJC5	107 aa		10.88	□□□□□ -0.67
SUPT20H-222	ENST00000495071	HIGD1C	A8MV81	97 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	DIAPH2-AS1	Q14236	149 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	C19orf35	Q6ZS72	473 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	ZNF833P	Q6ZTB9	187 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	NUP35	Q8NFH5	326 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	C18orf32	Q8TCD1	76 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	C22orf15	Q8WYQ4	148 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	CHRDL1	Q9BU40	450 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PPIAL4A	Q9Y536	164 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TCRBV4S1A1T	A0A5B7	111 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PGP	A6NDG6	321 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071		H3BTX0	84 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	C22orf34	Q6ZV56	151 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	ZNF329	Q86UD4	541 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	GRAMD2B	Q96HH9	432 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	SPEN	Q96T58	3664 aa	Known RBP	10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PLXNB1	O43157	2135 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	NDUFB3	O43676	98 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	VMA21	Q3ZAQ7	101 aa		10.87	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TNXA	Q16473	311 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TMEM200B	Q69YZ2	307 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TNFRSF19	Q9NS68	423 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	BOD1L1	Q8NFC6	3051 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	NIT1	Q86X76	327 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	C11orf42	Q8N5U0	333 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TMEM177	Q53S58	311 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	LRRC10	Q5BKY1	277 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	SPACA3	Q8IXA5	215 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	OR5AN1	Q8NGI8	311 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	DAZAP1	Q96EP5	407 aa	Known RBP	10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	WASHC3	Q9Y3C0	194 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	DCHS1	Q96JQ0	3298 aa		10.86	□□□□□ -0.67
SUPT20H-222	ENST00000495071	DYSF	O75923	2080 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PPIAL4E	A0A075B759	164 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PPIAL4D	F5H284	164 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	CORT	O00230	105 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PPIAL4F	P0DN26	164 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PATE2	Q6UY27	113 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TMEM167A	Q8TBQ9	72 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PERP	Q96FX8	193 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	CLEC7A	Q9BXN2	247 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	ZNF835	Q9Y2P0	537 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	HYPM	O75409	117 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	MEF2C	Q06413	473 aa	Predicted RBP	10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071		Q8N976	141 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TOX4	O94842	621 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	IGLC2	P0DOY2	106 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	IGLC3	P0DOY3	106 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TCF24	Q7RTU0	167 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	LINC00574	Q9H8X3	128 aa		10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	MRPL36	Q9P0J6	103 aa	Known RBP	10.85	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TANC2	Q9HCD6	1990 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	C17orf100	A8MU93	164 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TEX36	Q5VZQ5	186 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	LAMTOR2	Q9Y2Q5	125 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	FOXA3	P55318	350 aa	Predicted RBP	10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	MAJIN	Q3KP22	176 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TMEM186	Q96B77	213 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	FXYD5	Q96DB9	178 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	TPSG1	Q9NRR2	321 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	EPDR1	Q9UM22	224 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	DSCAML1	Q8TD84	2053 aa		10.84	□□□□□ -0.67
SUPT20H-222	ENST00000495071	PSMB11	A5LHX3	300 aa		10.83	□□□□□ -0.67
SUPT20H-222	ENST00000495071	SIAH2	O43255	324 aa		10.83	□□□□□ -0.67
SUPT20H-222	ENST00000495071	HINT1	P49773	126 aa	Predicted RBP	10.83	□□□□□ -0.67
SUPT20H-222	ENST00000495071	DMRTA1	Q5VZB9	504 aa		10.83	□□□□□ -0.67
SUPT20H-222	ENST00000495071	STXBP6	Q8NFX7	210 aa		10.83	□□□□□ -0.67
SUPT20H-222	ENST00000495071	MRPL27	Q9P0M9	148 aa	Known RBP	10.83	□□□□□ -0.67
SUPT20H-222	ENST00000495071	NBEAP1	P0C6P0	100 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071	PMCHL1	Q16048	86 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071	LEMD1	Q68G75	181 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071	FAM231D	Q6ZW35	169 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071	DYNLRB1	Q9NP97	96 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071		P01737	135 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071	ZNF137P	P52743	207 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071	ETFRF1	Q6IPR1	90 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071	RASL11A	Q6T310	242 aa		10.83	□□□□□ -0.68
SUPT20H-222	ENST00000495071		A0A1W2PPI3	338 aa		10.82	□□□□□ -0.68
SUPT20H-222	ENST00000495071	GDF5OS	Q5U4N7	250 aa		10.82	□□□□□ -0.68
SUPT20H-222	ENST00000495071	LYPD2	Q6UXB3	125 aa		10.82	□□□□□ -0.68
SUPT20H-222	ENST00000495071	OR4A5	Q8NH83	315 aa		10.82	□□□□□ -0.68
SUPT20H-222	ENST00000495071	PGLYRP4	Q96LB8	373 aa		10.82	□□□□□ -0.68

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