RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 TRAV2A0A0B4J234 112 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 ANKRD20A5PA0PJZ0 165 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 KNCNA6PVL3 124 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 DISC1C4P0D8 188 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 DNASE2O00115 360 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-208ENST00000494728 CTDSPLO15194 276 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 B3GALNT1O75752 331 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 ZNF688P0C7X2 276 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 SUB1P53999 127 aaKnown RBP eCLIP8.48□□□□□ -1.05
VTI1A-208ENST00000494728 TMEM187Q14656 261 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 USF2Q15853 346 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-208ENST00000494728 C2orf83Q53S99 150 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 TRPT1Q86TN4 253 aaKnown RBP8.48□□□□□ -1.05
VTI1A-208ENST00000494728 FAM219AQ8IW50 185 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 OR52E5Q8NH55 327 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 METTL26Q96S19 204 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 SLIRPQ9GZT3 109 aaKnown RBP8.48□□□□□ -1.05
VTI1A-208ENST00000494728 HEYLQ9NQ87 328 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-208ENST00000494728 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-208ENST00000494728 TMEM56-RWDD3S4R434 201 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 U3KQE9 123 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 HERC2O95714 4834 aa8.48□□□□□ -1.05
VTI1A-208ENST00000494728 H3BMQ9 156 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 NPPCP23582 126 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 HTR2BP41595 481 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 PAFAH1B2P68402 229 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 NMSQ5H8A3 153 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 Q8NAQ8 132 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 RAB2BQ8WUD1 216 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 GLMPQ8WWB7 406 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 SOSTQ9BQB4 213 aa8.47□□□□□ -1.05
VTI1A-208ENST00000494728 CEBPZOSA8MTT3 80 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 GSTZ1O43708 216 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-208ENST00000494728 CD5P06127 495 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 NPY1RP25929 384 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 OR10J1P30954 320 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 CMC4P56277 68 aaPredicted RBP8.46□□□□□ -1.06
VTI1A-208ENST00000494728 DHODHQ02127 395 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 GSG1LQ6UXU4 331 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 LYZL2Q7Z4W2 148 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 TMEM217Q8N7C4 229 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 OR1S2Q8NGQ3 325 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 TRIM63Q969Q1 353 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 PRRT1Q99946 306 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 TMEM231Q9H6L2 316 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 FBXL17Q9UF56 701 aa8.46□□□□□ -1.06
VTI1A-208ENST00000494728 IL4P05112 153 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
VTI1A-208ENST00000494728 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 SULT1A3P0DMM9 295 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 SULT1A4P0DMN0 295 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 TNFSF8P32971 234 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 TMBIM6P55061 237 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 PRR20EP86478 221 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 PRR20CP86479 221 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 PRR20DP86480 221 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 PRR20BP86481 221 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 PRR20AP86496 221 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 RBMY1FQ15415 496 aaKnown RBP8.45□□□□□ -1.06
VTI1A-208ENST00000494728 C16orf54Q6UWD8 224 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 STHQ8IWL8 128 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 C11orf45Q8TAV5 145 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 RNASEH2CQ8TDP1 164 aaKnown RBP8.45□□□□□ -1.06
VTI1A-208ENST00000494728 NPIPB3Q92617 1050 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 ACY3Q96HD9 319 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 GRAMD2BQ96HH9 432 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 CLEC5AQ9NY25 188 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 HSPB7Q9UBY9 170 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 KLK5Q9Y337 293 aaPredicted RBP8.45□□□□□ -1.06
VTI1A-208ENST00000494728 X6R8D5 127 aa8.45□□□□□ -1.06
VTI1A-208ENST00000494728 PKD1P98161 4303 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 IGKV1D-37A0A075B6S9 117 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 TRAV30A0A087WSZ9 112 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 RPS10-NUDT3A0A1W2PQS6 291 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 A0A1W2PS18 150 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 HNRNPCP07910 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
VTI1A-208ENST00000494728 AKR1C4P17516 323 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 DEFB1P60022 68 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 YPEL3P61236 119 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-208ENST00000494728 DHRS2Q13268 280 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 KLF9Q13886 244 aaPredicted RBP8.44□□□□□ -1.06
VTI1A-208ENST00000494728 PSMG4Q5JS54 123 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 ACTL10Q5JWF8 245 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 CSNK1G2-AS1Q8NCQ2 148 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 IL22RA2Q969J5 263 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 BCL7BQ9BQE9 202 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 RBKSQ9H477 322 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 MCUBQ9NWR8 336 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 V9GYH0 126 aa8.44□□□□□ -1.06
VTI1A-208ENST00000494728 ELOA3CA0A087WX78 387 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-208ENST00000494728 A0A0B4J2A0 478 aa8.43□□□□□ -1.06
VTI1A-208ENST00000494728 ZNF705EA8MWA4 302 aaPredicted RBP8.43□□□□□ -1.06
VTI1A-208ENST00000494728 FAM90A26D6RGX4 464 aa8.43□□□□□ -1.06
VTI1A-208ENST00000494728 TOMM40O96008 361 aa8.43□□□□□ -1.06
VTI1A-208ENST00000494728 PSG1P11464 419 aa8.43□□□□□ -1.06
VTI1A-208ENST00000494728 SLC25A4P12235 298 aa8.43□□□□□ -1.06
VTI1A-208ENST00000494728 ZNF79Q15937 498 aa8.43□□□□□ -1.06
VTI1A-208ENST00000494728 SHPKQ9UHJ6 478 aa8.43□□□□□ -1.06
VTI1A-208ENST00000494728 CELA1Q9UNI1 258 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms