RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ZNF562Q6V9R5 426 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 SLC22A18ASQ8N1D0 253 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 SPANXDQ9BXN6 97 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 TCF19Q9Y242 345 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 C3orf80F5H4A9 247 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 IGLV3-19P01714 112 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 GATA3P23771 443 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 FABP6P51161 128 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 XGP55808 180 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 HERV-K104P63124 156 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 FHL3Q13643 280 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 MRPL23Q16540 153 aaKnown RBP3.88□□□□□ -1.79
PRKD3-210ENST00000494667 C2orf83Q53S99 150 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 FAM90A1Q86YD7 464 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 NANOS1Q8WY41 292 aaKnown RBP3.88□□□□□ -1.79
PRKD3-210ENST00000494667 CHAC1Q9BUX1 264 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 SPANXCQ9NY87 97 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 ARID1AO14497 2285 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 A0A1W2PQF6 199 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM30CPA0ZSE6 113 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM213A2RRL7 107 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 CER1O95813 267 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF766Q5HY98 468 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 OR1L8Q8NGR8 309 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 PPDPFLQ8WWR9 84 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 FOXB1Q99853 325 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 HHLA3Q9XRX5 114 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 HILPDAQ9Y5L2 63 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ALPK2Q86TB3 2170 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 SPTY2D1-AS1A0A0U1RR47 76 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 WI2-2373I1.2A0A1W2PRP0 233 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 LINC00473A8K010 186 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 SLC31A1O15431 190 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 MT-ATP8P03928 68 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 CELA2AP08217 269 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 MGST1P10620 155 aaKnown RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM177Q53S58 311 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 PVRIGQ6DKI7 326 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 BCL6BQ8N143 479 aaPredicted RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ITLN1Q8WWA0 313 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM126AQ9H061 195 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 SS18L2Q9UHA2 77 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 CHCHD2Q9Y6H1 151 aaPredicted RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ARHGEF17Q96PE2 2063 aaPredicted RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 TRBV7-3A0A075B6L6 115 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 IGHV5-51A0A0C4DH38 117 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 OR2H2O95918 312 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 B4GALT1P15291 398 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 SMCPP49901 116 aaPredicted RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 DSCR4P56555 118 aaPredicted RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF816Q0VGE8 651 aaPredicted RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 OR1C1Q15619 314 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF542PQ5EBM4 170 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 COX8CQ7Z4L0 72 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 FGFBP3Q8TAT2 258 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 FXYD5Q96DB9 178 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF837Q96EG3 531 aaPredicted RBP3.87□□□□□ -1.79
PRKD3-210ENST00000494667 ANAPC13Q9BS18 74 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 RNF208Q9H0X6 261 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 MDFICQ9P1T7 246 aa3.87□□□□□ -1.79
PRKD3-210ENST00000494667 IGKV3D-15A0A087WSY6 115 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 FBLL1A6NHQ2 334 aaKnown RBP3.86□□□□□ -1.79
PRKD3-210ENST00000494667 NPIPB5A8MRT5 1133 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 APOMO95445 188 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 ZFAND6Q6FIF0 208 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 IGF2-ASQ6U949 168 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 MOB3BQ86TA1 216 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 THAP8Q8NA92 274 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 ARPC1AQ92747 370 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 C20orf78Q9BR46 151 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 SSBP3Q9BWW4 388 aaPredicted RBP3.86□□□□□ -1.79
PRKD3-210ENST00000494667 KLRF1Q9NZS2 232 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 LOC102723996A0A087X1L8 192 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 C12orf77C9JDV5 145 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 H0Y8X5 98 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 C16orf97H3BN30 126 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 C15orf65H3BRN8 121 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 HBDP02042 147 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 UBE2D3P61077 147 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 HSPE1P61604 102 aaKnown RBP3.86□□□□□ -1.79
PRKD3-210ENST00000494667 UBE2D2P62837 147 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 ATP5G2Q06055 141 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 ODF1Q14990 250 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 C12orf74Q32Q52 190 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 ETDBQ3ZM63 59 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 SPRNQ5BIV9 151 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 SYT8Q8NBV8 401 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 MYOZ3Q8TDC0 251 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 EPDR1Q9UM22 224 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 A0A1W2PQM1 296 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 GAGE12JA6NER3 117 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 FABP5P3A8MUU1 101 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 GAGE7O76087 117 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 GAGE12FP0CL80 117 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 GAGE12GP0CL81 117 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 GAGE12IP0CL82 117 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 B3GALT5-AS1P59052 145 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 GAGE4Q13068 117 aa3.86□□□□□ -1.79
PRKD3-210ENST00000494667 ACP7Q6ZNF0 438 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms